Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Gm6420-201ENSMUST00000193885 723 ntBASIC19.56■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl9-ps6A0A140T8T4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.54■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl9-ps6A0A140T8T4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpl9-ps6A0A140T8T4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Nespas-201ENSMUST00000143738 1083 ntBASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.51■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.5■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.5■□□□□ 0.71
Rpl9-ps6A0A140T8T4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.5■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Gm7290-201ENSMUST00000104990 617 ntBASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Gm12918-201ENSMUST00000120234 636 ntBASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Gm15710-201ENSMUST00000121821 636 ntBASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Gm5075-201ENSMUST00000196916 622 ntBASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Gm10602-201ENSMUST00000098239 609 ntBASIC19.49■□□□□ 0.71
Rpl9-ps6A0A140T8T4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms