Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trbv17A0A140T8P8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trbv17A0A140T8P8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 Gm43017-201ENSMUST00000198296 752 ntBASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv17A0A140T8P8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.57□□□□□ -0.08
Trbv17A0A140T8P8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv17A0A140T8P8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Gm43173-201ENSMUST00000202246 593 ntBASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv17A0A140T8P8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Gm11421-201ENSMUST00000122124 294 ntBASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Smad6-203ENSMUST00000179458 273 ntBASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Serp2-204ENSMUST00000228055 705 ntBASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.54□□□□□ -0.08
Trbv17A0A140T8P8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms