Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trbv26A0A0B4J1P5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.86■□□□□ 0.13
Trbv26A0A0B4J1P5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trbv26A0A0B4J1P5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trbv26A0A0B4J1P5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv26A0A0B4J1P5 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Gm10493-201ENSMUST00000097270 612 ntBASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Trbv26A0A0B4J1P5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv26A0A0B4J1P5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv26A0A0B4J1P5 Gm42778-201ENSMUST00000199644 553 ntBASIC15.84■□□□□ 0.13
Trbv26A0A0B4J1P5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trbv26A0A0B4J1P5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv26A0A0B4J1P5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv26A0A0B4J1P5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv26A0A0B4J1P5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Gm5874-201ENSMUST00000096101 508 ntBASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv26A0A0B4J1P5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Gm18284-201ENSMUST00000172604 624 ntBASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv26A0A0B4J1P5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv26A0A0B4J1P5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trbv26A0A0B4J1P5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Trbv26A0A0B4J1P5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv26A0A0B4J1P5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv26A0A0B4J1P5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv26A0A0B4J1P5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv26A0A0B4J1P5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv26A0A0B4J1P5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv26A0A0B4J1P5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv26A0A0B4J1P5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv26A0A0B4J1P5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trbv26A0A0B4J1P5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv26A0A0B4J1P5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv26A0A0B4J1P5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv26A0A0B4J1P5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv26A0A0B4J1P5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv26A0A0B4J1P5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv26A0A0B4J1P5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv26A0A0B4J1P5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.8■□□□□ 0.12
Trbv26A0A0B4J1P5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv26A0A0B4J1P5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms