Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-4A0A075B6B4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-4A0A075B6B4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav6-4A0A075B6B4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-4A0A075B6B4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-4A0A075B6B4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav6-4A0A075B6B4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav6-4A0A075B6B4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav6-4A0A075B6B4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-4A0A075B6B4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-4A0A075B6B4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.64□□□□□ -0.07
Trav6-4A0A075B6B4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Gm15039-201ENSMUST00000118914 875 ntBASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-4A0A075B6B4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Gm9988-201ENSMUST00000069786 435 ntBASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6-4A0A075B6B4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Golph3-202ENSMUST00000226517 2359 ntBASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms