Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav3-4A0A075B654 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav3-4A0A075B654 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav3-4A0A075B654 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav3-4A0A075B654 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav3-4A0A075B654 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Trav3-4A0A075B654 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-4A0A075B654 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-4A0A075B654 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav3-4A0A075B654 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-4A0A075B654 Gm6821-201ENSMUST00000107540 542 ntBASIC12.83□□□□□ -0.36
Trav3-4A0A075B654 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-4A0A075B654 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-4A0A075B654 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-4A0A075B654 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-4A0A075B654 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-4A0A075B654 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-4A0A075B654 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav3-4A0A075B654 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav3-4A0A075B654 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav3-4A0A075B654 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-4A0A075B654 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-4A0A075B654 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.82□□□□□ -0.36
Trav3-4A0A075B654 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-4A0A075B654 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-4A0A075B654 Gm9939-201ENSMUST00000067161 1154 ntBASIC12.82□□□□□ -0.36
Trav3-4A0A075B654 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-4A0A075B654 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav3-4A0A075B654 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-4A0A075B654 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav3-4A0A075B654 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav3-4A0A075B654 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav3-4A0A075B654 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms