Protein–RNA interactions for Protein: Q9Z1X0

Ccl27, C-C motif chemokine 27, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl27Q9Z1X0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccl27Q9Z1X0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccl27Q9Z1X0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ccl27Q9Z1X0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.77■□□□□ 0.44
Ccl27Q9Z1X0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccl27Q9Z1X0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccl27Q9Z1X0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccl27Q9Z1X0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.77■□□□□ 0.44
Ccl27Q9Z1X0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ccl27Q9Z1X0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccl27Q9Z1X0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ccl27Q9Z1X0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ccl27Q9Z1X0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccl27Q9Z1X0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Ccl27Q9Z1X0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccl27Q9Z1X0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccl27Q9Z1X0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccl27Q9Z1X0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Ccl27Q9Z1X0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccl27Q9Z1X0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.75■□□□□ 0.43
Ccl27Q9Z1X0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.75■□□□□ 0.43
Ccl27Q9Z1X0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccl27Q9Z1X0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccl27Q9Z1X0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccl27Q9Z1X0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl27Q9Z1X0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl27Q9Z1X0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl27Q9Z1X0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.74■□□□□ 0.43
Ccl27Q9Z1X0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ccl27Q9Z1X0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl27Q9Z1X0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl27Q9Z1X0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.74■□□□□ 0.43
Ccl27Q9Z1X0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ccl27Q9Z1X0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ccl27Q9Z1X0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl27Q9Z1X0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl27Q9Z1X0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl27Q9Z1X0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 Gm38205-201ENSMUST00000192243 258 ntBASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ccl27Q9Z1X0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Gm7860-201ENSMUST00000121190 879 ntBASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Gm9988-201ENSMUST00000069786 435 ntBASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl27Q9Z1X0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl27Q9Z1X0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl27Q9Z1X0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ccl27Q9Z1X0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl27Q9Z1X0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl27Q9Z1X0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl27Q9Z1X0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl27Q9Z1X0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl27Q9Z1X0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl27Q9Z1X0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl27Q9Z1X0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl27Q9Z1X0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl27Q9Z1X0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl27Q9Z1X0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl27Q9Z1X0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl27Q9Z1X0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl27Q9Z1X0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccl27Q9Z1X0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms