Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Gm37179-201ENSMUST00000194862 823 ntBASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.54■□□□□ 0.4
Phf1Q9Z1B8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phf1Q9Z1B8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phf1Q9Z1B8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.53■□□□□ 0.4
Phf1Q9Z1B8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phf1Q9Z1B8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Phf1Q9Z1B8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phf1Q9Z1B8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Phf1Q9Z1B8 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.53■□□□□ 0.4
Phf1Q9Z1B8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Phf1Q9Z1B8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Phf1Q9Z1B8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Phf1Q9Z1B8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Phf1Q9Z1B8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.52■□□□□ 0.4
Phf1Q9Z1B8 Gm27801-201ENSMUST00000184174 223 ntBASIC17.52■□□□□ 0.4
Phf1Q9Z1B8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.52■□□□□ 0.4
Phf1Q9Z1B8 Gm18671-201ENSMUST00000214826 683 ntBASIC17.52■□□□□ 0.4
Phf1Q9Z1B8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.52■□□□□ 0.4
Phf1Q9Z1B8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Phf1Q9Z1B8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Phf1Q9Z1B8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Phf1Q9Z1B8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Phf1Q9Z1B8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Phf1Q9Z1B8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Phf1Q9Z1B8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Phf1Q9Z1B8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Phf1Q9Z1B8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.5■□□□□ 0.39
Phf1Q9Z1B8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.5■□□□□ 0.39
Phf1Q9Z1B8 AV356131-201ENSMUST00000206201 750 ntBASIC17.5■□□□□ 0.39
Phf1Q9Z1B8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Phf1Q9Z1B8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Phf1Q9Z1B8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Phf1Q9Z1B8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Phf1Q9Z1B8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Phf1Q9Z1B8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.5■□□□□ 0.39
Phf1Q9Z1B8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.5■□□□□ 0.39
Phf1Q9Z1B8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Phf1Q9Z1B8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Phf1Q9Z1B8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Phf1Q9Z1B8 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.49■□□□□ 0.39
Phf1Q9Z1B8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Phf1Q9Z1B8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Phf1Q9Z1B8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Phf1Q9Z1B8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Phf1Q9Z1B8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Phf1Q9Z1B8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.49■□□□□ 0.39
Phf1Q9Z1B8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Phf1Q9Z1B8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Phf1Q9Z1B8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phf1Q9Z1B8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
Phf1Q9Z1B8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms