Protein–RNA interactions for Protein: Q9WU22

Ptpn4, Tyrosine-protein phosphatase non-receptor type 4, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn4Q9WU22 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptpn4Q9WU22 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Ptpn4Q9WU22 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ptpn4Q9WU22 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.79■□□□□ 0.6
Ptpn4Q9WU22 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.78■□□□□ 0.6
Ptpn4Q9WU22 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ptpn4Q9WU22 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ptpn4Q9WU22 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ptpn4Q9WU22 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ptpn4Q9WU22 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.76■□□□□ 0.59
Ptpn4Q9WU22 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpn4Q9WU22 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpn4Q9WU22 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpn4Q9WU22 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpn4Q9WU22 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpn4Q9WU22 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpn4Q9WU22 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpn4Q9WU22 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpn4Q9WU22 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ptpn4Q9WU22 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Gm7143-201ENSMUST00000222811 859 ntBASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ptpn4Q9WU22 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpn4Q9WU22 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpn4Q9WU22 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.74■□□□□ 0.59
Ptpn4Q9WU22 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpn4Q9WU22 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ptpn4Q9WU22 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.74■□□□□ 0.59
Ptpn4Q9WU22 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.74■□□□□ 0.59
Ptpn4Q9WU22 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ptpn4Q9WU22 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpn4Q9WU22 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpn4Q9WU22 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpn4Q9WU22 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ptpn4Q9WU22 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptpn4Q9WU22 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms