Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm10653-202ENSMUST00000139570 835 ntBASIC20.7■□□□□ 0.9
Trim54Q9ERP3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim54Q9ERP3 Gm5075-201ENSMUST00000196916 622 ntBASIC20.7■□□□□ 0.9
Trim54Q9ERP3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim54Q9ERP3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim54Q9ERP3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.7■□□□□ 0.9
Trim54Q9ERP3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.7■□□□□ 0.9
Trim54Q9ERP3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim54Q9ERP3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim54Q9ERP3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Trim54Q9ERP3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim54Q9ERP3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim54Q9ERP3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim54Q9ERP3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim54Q9ERP3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim54Q9ERP3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Trim54Q9ERP3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Gm5408-201ENSMUST00000197998 747 ntBASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim54Q9ERP3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim54Q9ERP3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim54Q9ERP3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim54Q9ERP3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trim54Q9ERP3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim54Q9ERP3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim54Q9ERP3 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.67■□□□□ 0.9
Trim54Q9ERP3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim54Q9ERP3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim54Q9ERP3 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.66■□□□□ 0.9
Trim54Q9ERP3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim54Q9ERP3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.66■□□□□ 0.9
Trim54Q9ERP3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.66■□□□□ 0.9
Trim54Q9ERP3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim54Q9ERP3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim54Q9ERP3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim54Q9ERP3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim54Q9ERP3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim54Q9ERP3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim54Q9ERP3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim54Q9ERP3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim54Q9ERP3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim54Q9ERP3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim54Q9ERP3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim54Q9ERP3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim54Q9ERP3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.64■□□□□ 0.89
Trim54Q9ERP3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim54Q9ERP3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.64■□□□□ 0.89
Trim54Q9ERP3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Trim54Q9ERP3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim54Q9ERP3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trim54Q9ERP3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim54Q9ERP3 Gm12527-201ENSMUST00000117967 564 ntBASIC20.63■□□□□ 0.89
Trim54Q9ERP3 Gm6211-202ENSMUST00000167849 925 ntBASIC20.63■□□□□ 0.89
Trim54Q9ERP3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim54Q9ERP3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.63■□□□□ 0.89
Trim54Q9ERP3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim54Q9ERP3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim54Q9ERP3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim54Q9ERP3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trim54Q9ERP3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim54Q9ERP3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim54Q9ERP3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim54Q9ERP3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim54Q9ERP3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Trim54Q9ERP3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim54Q9ERP3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trim54Q9ERP3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms