Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Vps35Q9EQH3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps35Q9EQH3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps35Q9EQH3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps35Q9EQH3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps35Q9EQH3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vps35Q9EQH3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vps35Q9EQH3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vps35Q9EQH3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vps35Q9EQH3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
Vps35Q9EQH3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.08■□□□□ 0.64
Vps35Q9EQH3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.08■□□□□ 0.64
Vps35Q9EQH3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps35Q9EQH3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps35Q9EQH3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Vps35Q9EQH3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps35Q9EQH3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vps35Q9EQH3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps35Q9EQH3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Vps35Q9EQH3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps35Q9EQH3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps35Q9EQH3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Vps35Q9EQH3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps35Q9EQH3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps35Q9EQH3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps35Q9EQH3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Vps35Q9EQH3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps35Q9EQH3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Vps35Q9EQH3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps35Q9EQH3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps35Q9EQH3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Vps35Q9EQH3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Vps35Q9EQH3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps35Q9EQH3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps35Q9EQH3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Vps35Q9EQH3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps35Q9EQH3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vps35Q9EQH3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.04■□□□□ 0.64
Vps35Q9EQH3 Gm18284-201ENSMUST00000172604 624 ntBASIC19.04■□□□□ 0.64
Vps35Q9EQH3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vps35Q9EQH3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.04■□□□□ 0.64
Vps35Q9EQH3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.04■□□□□ 0.64
Vps35Q9EQH3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps35Q9EQH3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps35Q9EQH3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.04■□□□□ 0.64
Vps35Q9EQH3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Vps35Q9EQH3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps35Q9EQH3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps35Q9EQH3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps35Q9EQH3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.03■□□□□ 0.64
Vps35Q9EQH3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps35Q9EQH3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps35Q9EQH3 Gm10493-201ENSMUST00000097270 612 ntBASIC19.03■□□□□ 0.64
Vps35Q9EQH3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps35Q9EQH3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps35Q9EQH3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps35Q9EQH3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps35Q9EQH3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps35Q9EQH3 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.02■□□□□ 0.64
Vps35Q9EQH3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps35Q9EQH3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps35Q9EQH3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vps35Q9EQH3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Vps35Q9EQH3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.02■□□□□ 0.64
Vps35Q9EQH3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps35Q9EQH3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Vps35Q9EQH3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Vps35Q9EQH3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps35Q9EQH3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Vps35Q9EQH3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vps35Q9EQH3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps35Q9EQH3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Vps35Q9EQH3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps35Q9EQH3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps35Q9EQH3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps35Q9EQH3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps35Q9EQH3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vps35Q9EQH3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19■□□□□ 0.63
Vps35Q9EQH3 Gm20100-201ENSMUST00000209418 2272 ntBASIC19■□□□□ 0.63
Vps35Q9EQH3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps35Q9EQH3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Vps35Q9EQH3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms