Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr3Q9DCF9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr3Q9DCF9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ssr3Q9DCF9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr3Q9DCF9 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.11■□□□□ 0.33
Ssr3Q9DCF9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr3Q9DCF9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Ssr3Q9DCF9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr3Q9DCF9 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.11■□□□□ 0.33
Ssr3Q9DCF9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ssr3Q9DCF9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr3Q9DCF9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr3Q9DCF9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ssr3Q9DCF9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ssr3Q9DCF9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssr3Q9DCF9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ssr3Q9DCF9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ssr3Q9DCF9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ssr3Q9DCF9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ssr3Q9DCF9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr3Q9DCF9 Gm7143-201ENSMUST00000222811 859 ntBASIC17.08■□□□□ 0.32
Ssr3Q9DCF9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr3Q9DCF9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr3Q9DCF9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr3Q9DCF9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ssr3Q9DCF9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr3Q9DCF9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr3Q9DCF9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.07■□□□□ 0.32
Ssr3Q9DCF9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr3Q9DCF9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr3Q9DCF9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr3Q9DCF9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ssr3Q9DCF9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ssr3Q9DCF9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr3Q9DCF9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr3Q9DCF9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr3Q9DCF9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr3Q9DCF9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ssr3Q9DCF9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ssr3Q9DCF9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr3Q9DCF9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr3Q9DCF9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr3Q9DCF9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr3Q9DCF9 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.06■□□□□ 0.32
Ssr3Q9DCF9 Gm10420-201ENSMUST00000121713 882 ntBASIC17.06■□□□□ 0.32
Ssr3Q9DCF9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr3Q9DCF9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.06■□□□□ 0.32
Ssr3Q9DCF9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssr3Q9DCF9 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.06■□□□□ 0.32
Ssr3Q9DCF9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr3Q9DCF9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ssr3Q9DCF9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr3Q9DCF9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ssr3Q9DCF9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr3Q9DCF9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr3Q9DCF9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr3Q9DCF9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr3Q9DCF9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.05■□□□□ 0.32
Ssr3Q9DCF9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr3Q9DCF9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssr3Q9DCF9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ssr3Q9DCF9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr3Q9DCF9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr3Q9DCF9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssr3Q9DCF9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms