Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shmt2Q9CZN7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.22■□□□□ 0.51
Shmt2Q9CZN7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shmt2Q9CZN7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Shmt2Q9CZN7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shmt2Q9CZN7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Shmt2Q9CZN7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shmt2Q9CZN7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Gm12251-201ENSMUST00000117893 792 ntBASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shmt2Q9CZN7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Shmt2Q9CZN7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shmt2Q9CZN7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shmt2Q9CZN7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shmt2Q9CZN7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shmt2Q9CZN7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Shmt2Q9CZN7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.19■□□□□ 0.5
Shmt2Q9CZN7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shmt2Q9CZN7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Shmt2Q9CZN7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Gm43173-201ENSMUST00000202246 593 ntBASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shmt2Q9CZN7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shmt2Q9CZN7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shmt2Q9CZN7 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.16■□□□□ 0.5
Shmt2Q9CZN7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shmt2Q9CZN7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.16■□□□□ 0.5
Shmt2Q9CZN7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shmt2Q9CZN7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Shmt2Q9CZN7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shmt2Q9CZN7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shmt2Q9CZN7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Shmt2Q9CZN7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shmt2Q9CZN7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shmt2Q9CZN7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shmt2Q9CZN7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.15■□□□□ 0.5
Shmt2Q9CZN7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms