Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh23Q99PF4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh23Q99PF4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh23Q99PF4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.82■□□□□ 0.76
Cdh23Q99PF4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh23Q99PF4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.81■□□□□ 0.76
Cdh23Q99PF4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.81■□□□□ 0.76
Cdh23Q99PF4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh23Q99PF4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.81■□□□□ 0.76
Cdh23Q99PF4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh23Q99PF4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh23Q99PF4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh23Q99PF4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh23Q99PF4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.8■□□□□ 0.76
Cdh23Q99PF4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.8■□□□□ 0.76
Cdh23Q99PF4 Gm7367-201ENSMUST00000057611 492 ntBASIC19.79■□□□□ 0.76
Cdh23Q99PF4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh23Q99PF4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cdh23Q99PF4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh23Q99PF4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh23Q99PF4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh23Q99PF4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.78■□□□□ 0.76
Cdh23Q99PF4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.78■□□□□ 0.76
Cdh23Q99PF4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh23Q99PF4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh23Q99PF4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh23Q99PF4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh23Q99PF4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh23Q99PF4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh23Q99PF4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cdh23Q99PF4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Cdh23Q99PF4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.77■□□□□ 0.76
Cdh23Q99PF4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.77■□□□□ 0.76
Cdh23Q99PF4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.77■□□□□ 0.76
Cdh23Q99PF4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Cdh23Q99PF4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh23Q99PF4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cdh23Q99PF4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.77■□□□□ 0.76
Cdh23Q99PF4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cdh23Q99PF4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh23Q99PF4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cdh23Q99PF4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh23Q99PF4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh23Q99PF4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cdh23Q99PF4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh23Q99PF4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh23Q99PF4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh23Q99PF4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cdh23Q99PF4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh23Q99PF4 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.76■□□□□ 0.75
Cdh23Q99PF4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh23Q99PF4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh23Q99PF4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cdh23Q99PF4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh23Q99PF4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cdh23Q99PF4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.75■□□□□ 0.75
Cdh23Q99PF4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cdh23Q99PF4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cdh23Q99PF4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh23Q99PF4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh23Q99PF4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cdh23Q99PF4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.74■□□□□ 0.75
Cdh23Q99PF4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh23Q99PF4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cdh23Q99PF4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cdh23Q99PF4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cdh23Q99PF4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh23Q99PF4 Gm2399-201ENSMUST00000104944 225 ntBASIC19.74■□□□□ 0.75
Cdh23Q99PF4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh23Q99PF4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.74■□□□□ 0.75
Cdh23Q99PF4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cdh23Q99PF4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cdh23Q99PF4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.73■□□□□ 0.75
Cdh23Q99PF4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.73■□□□□ 0.75
Cdh23Q99PF4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh23Q99PF4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh23Q99PF4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh23Q99PF4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms