Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.51■□□□□ 0.87
Tlr3Q99MB1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.51■□□□□ 0.87
Tlr3Q99MB1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.51■□□□□ 0.87
Tlr3Q99MB1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tlr3Q99MB1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tlr3Q99MB1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Tlr3Q99MB1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tlr3Q99MB1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Tlr3Q99MB1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tlr3Q99MB1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tlr3Q99MB1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Tlr3Q99MB1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Tlr3Q99MB1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tlr3Q99MB1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.5■□□□□ 0.87
Tlr3Q99MB1 Gm42569-201ENSMUST00000200539 472 ntBASIC20.5■□□□□ 0.87
Tlr3Q99MB1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tlr3Q99MB1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tlr3Q99MB1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tlr3Q99MB1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tlr3Q99MB1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tlr3Q99MB1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tlr3Q99MB1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tlr3Q99MB1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tlr3Q99MB1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Tlr3Q99MB1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tlr3Q99MB1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Tlr3Q99MB1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tlr3Q99MB1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tlr3Q99MB1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Tlr3Q99MB1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tlr3Q99MB1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Tlr3Q99MB1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tlr3Q99MB1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Tlr3Q99MB1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.47■□□□□ 0.87
Tlr3Q99MB1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tlr3Q99MB1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tlr3Q99MB1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tlr3Q99MB1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tlr3Q99MB1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.47■□□□□ 0.87
Tlr3Q99MB1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.47■□□□□ 0.87
Tlr3Q99MB1 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.47■□□□□ 0.87
Tlr3Q99MB1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Tlr3Q99MB1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tlr3Q99MB1 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.46■□□□□ 0.87
Tlr3Q99MB1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Tlr3Q99MB1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tlr3Q99MB1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tlr3Q99MB1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.46■□□□□ 0.87
Tlr3Q99MB1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Tlr3Q99MB1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tlr3Q99MB1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tlr3Q99MB1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tlr3Q99MB1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tlr3Q99MB1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tlr3Q99MB1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Tlr3Q99MB1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tlr3Q99MB1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.45■□□□□ 0.86
Tlr3Q99MB1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
Tlr3Q99MB1 Gm42642-201ENSMUST00000200683 355 ntBASIC20.45■□□□□ 0.86
Tlr3Q99MB1 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.45■□□□□ 0.86
Tlr3Q99MB1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tlr3Q99MB1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Tlr3Q99MB1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tlr3Q99MB1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tlr3Q99MB1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tlr3Q99MB1 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.45■□□□□ 0.86
Tlr3Q99MB1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Tlr3Q99MB1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tlr3Q99MB1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tlr3Q99MB1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.44■□□□□ 0.86
Tlr3Q99MB1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tlr3Q99MB1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Tlr3Q99MB1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.44■□□□□ 0.86
Tlr3Q99MB1 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.44■□□□□ 0.86
Tlr3Q99MB1 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.44■□□□□ 0.86
Tlr3Q99MB1 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.44■□□□□ 0.86
Tlr3Q99MB1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tlr3Q99MB1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tlr3Q99MB1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Tlr3Q99MB1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tlr3Q99MB1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tlr3Q99MB1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tlr3Q99MB1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tlr3Q99MB1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tlr3Q99MB1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms