Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.66■□□□□ 0.58
Cdhr1Q8VHP6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.66■□□□□ 0.58
Cdhr1Q8VHP6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdhr1Q8VHP6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdhr1Q8VHP6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdhr1Q8VHP6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdhr1Q8VHP6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdhr1Q8VHP6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdhr1Q8VHP6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cdhr1Q8VHP6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Cdhr1Q8VHP6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdhr1Q8VHP6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdhr1Q8VHP6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdhr1Q8VHP6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Cdhr1Q8VHP6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.64■□□□□ 0.57
Cdhr1Q8VHP6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdhr1Q8VHP6 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.64■□□□□ 0.57
Cdhr1Q8VHP6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdhr1Q8VHP6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdhr1Q8VHP6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdhr1Q8VHP6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cdhr1Q8VHP6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cdhr1Q8VHP6 Gm6365-201ENSMUST00000054711 744 ntBASIC18.62■□□□□ 0.57
Cdhr1Q8VHP6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cdhr1Q8VHP6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdhr1Q8VHP6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdhr1Q8VHP6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdhr1Q8VHP6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdhr1Q8VHP6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdhr1Q8VHP6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdhr1Q8VHP6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.61■□□□□ 0.57
Cdhr1Q8VHP6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Gm7290-201ENSMUST00000104990 617 ntBASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Gm13148-201ENSMUST00000118892 745 ntBASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Gm12918-201ENSMUST00000120234 636 ntBASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Gm12441-201ENSMUST00000121806 588 ntBASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Gm15710-201ENSMUST00000121821 636 ntBASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Gm5075-201ENSMUST00000196916 622 ntBASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdhr1Q8VHP6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdhr1Q8VHP6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cdhr1Q8VHP6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdhr1Q8VHP6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.59■□□□□ 0.57
Cdhr1Q8VHP6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.59■□□□□ 0.57
Cdhr1Q8VHP6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.59■□□□□ 0.57
Cdhr1Q8VHP6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.59■□□□□ 0.57
Cdhr1Q8VHP6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdhr1Q8VHP6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdhr1Q8VHP6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cdhr1Q8VHP6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cdhr1Q8VHP6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
Cdhr1Q8VHP6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdhr1Q8VHP6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cdhr1Q8VHP6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cdhr1Q8VHP6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Cdhr1Q8VHP6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.58■□□□□ 0.56
Cdhr1Q8VHP6 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.58■□□□□ 0.56
Cdhr1Q8VHP6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdhr1Q8VHP6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdhr1Q8VHP6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cdhr1Q8VHP6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms