Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rftn2Q8CHX7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rftn2Q8CHX7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rftn2Q8CHX7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rftn2Q8CHX7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rftn2Q8CHX7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.4■□□□□ 0.86
Rftn2Q8CHX7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rftn2Q8CHX7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rftn2Q8CHX7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rftn2Q8CHX7 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.4■□□□□ 0.86
Rftn2Q8CHX7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rftn2Q8CHX7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rftn2Q8CHX7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rftn2Q8CHX7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
Rftn2Q8CHX7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rftn2Q8CHX7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rftn2Q8CHX7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rftn2Q8CHX7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rftn2Q8CHX7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rftn2Q8CHX7 Nespas-201ENSMUST00000143738 1083 ntBASIC20.39■□□□□ 0.85
Rftn2Q8CHX7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rftn2Q8CHX7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rftn2Q8CHX7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rftn2Q8CHX7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rftn2Q8CHX7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rftn2Q8CHX7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rftn2Q8CHX7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rftn2Q8CHX7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rftn2Q8CHX7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rftn2Q8CHX7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rftn2Q8CHX7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rftn2Q8CHX7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rftn2Q8CHX7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.38■□□□□ 0.85
Rftn2Q8CHX7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.38■□□□□ 0.85
Rftn2Q8CHX7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rftn2Q8CHX7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rftn2Q8CHX7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rftn2Q8CHX7 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.37■□□□□ 0.85
Rftn2Q8CHX7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rftn2Q8CHX7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rftn2Q8CHX7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rftn2Q8CHX7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rftn2Q8CHX7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.37■□□□□ 0.85
Rftn2Q8CHX7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rftn2Q8CHX7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rftn2Q8CHX7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rftn2Q8CHX7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rftn2Q8CHX7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rftn2Q8CHX7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rftn2Q8CHX7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rftn2Q8CHX7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.36■□□□□ 0.85
Rftn2Q8CHX7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rftn2Q8CHX7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rftn2Q8CHX7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.36■□□□□ 0.85
Rftn2Q8CHX7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rftn2Q8CHX7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rftn2Q8CHX7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rftn2Q8CHX7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rftn2Q8CHX7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rftn2Q8CHX7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.36■□□□□ 0.85
Rftn2Q8CHX7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rftn2Q8CHX7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rftn2Q8CHX7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rftn2Q8CHX7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rftn2Q8CHX7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rftn2Q8CHX7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rftn2Q8CHX7 Gm6365-201ENSMUST00000054711 744 ntBASIC20.35■□□□□ 0.85
Rftn2Q8CHX7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Rftn2Q8CHX7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rftn2Q8CHX7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rftn2Q8CHX7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rftn2Q8CHX7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rftn2Q8CHX7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rftn2Q8CHX7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rftn2Q8CHX7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.34■□□□□ 0.85
Rftn2Q8CHX7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rftn2Q8CHX7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.34■□□□□ 0.85
Rftn2Q8CHX7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.34■□□□□ 0.85
Rftn2Q8CHX7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rftn2Q8CHX7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rftn2Q8CHX7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rftn2Q8CHX7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rftn2Q8CHX7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rftn2Q8CHX7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Rftn2Q8CHX7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Rftn2Q8CHX7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rftn2Q8CHX7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rftn2Q8CHX7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rftn2Q8CHX7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rftn2Q8CHX7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Rftn2Q8CHX7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rftn2Q8CHX7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rftn2Q8CHX7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rftn2Q8CHX7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rftn2Q8CHX7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rftn2Q8CHX7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Rftn2Q8CHX7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rftn2Q8CHX7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rftn2Q8CHX7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rftn2Q8CHX7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms