Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShfQ8CG80 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShfQ8CG80 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ShfQ8CG80 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShfQ8CG80 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShfQ8CG80 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShfQ8CG80 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ShfQ8CG80 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShfQ8CG80 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShfQ8CG80 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShfQ8CG80 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShfQ8CG80 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ShfQ8CG80 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShfQ8CG80 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShfQ8CG80 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
ShfQ8CG80 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShfQ8CG80 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.04■□□□□ 0.32
ShfQ8CG80 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ShfQ8CG80 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShfQ8CG80 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShfQ8CG80 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ShfQ8CG80 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.03■□□□□ 0.32
ShfQ8CG80 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.03■□□□□ 0.32
ShfQ8CG80 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.03■□□□□ 0.32
ShfQ8CG80 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ShfQ8CG80 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.03■□□□□ 0.32
ShfQ8CG80 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShfQ8CG80 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ShfQ8CG80 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShfQ8CG80 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.02■□□□□ 0.32
ShfQ8CG80 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.02■□□□□ 0.32
ShfQ8CG80 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ShfQ8CG80 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShfQ8CG80 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ShfQ8CG80 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShfQ8CG80 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShfQ8CG80 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ShfQ8CG80 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShfQ8CG80 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ShfQ8CG80 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ShfQ8CG80 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ShfQ8CG80 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ShfQ8CG80 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
ShfQ8CG80 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ShfQ8CG80 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ShfQ8CG80 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShfQ8CG80 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
ShfQ8CG80 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.01■□□□□ 0.31
ShfQ8CG80 Spcs1-204ENSMUST00000226782 949 ntBASIC17.01■□□□□ 0.31
ShfQ8CG80 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShfQ8CG80 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ShfQ8CG80 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ShfQ8CG80 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShfQ8CG80 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ShfQ8CG80 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ShfQ8CG80 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShfQ8CG80 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
ShfQ8CG80 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ShfQ8CG80 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShfQ8CG80 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17■□□□□ 0.31
ShfQ8CG80 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ShfQ8CG80 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShfQ8CG80 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
ShfQ8CG80 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ShfQ8CG80 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShfQ8CG80 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShfQ8CG80 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ShfQ8CG80 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ShfQ8CG80 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ShfQ8CG80 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.99■□□□□ 0.31
ShfQ8CG80 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShfQ8CG80 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ShfQ8CG80 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShfQ8CG80 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShfQ8CG80 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.99■□□□□ 0.31
ShfQ8CG80 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.99■□□□□ 0.31
ShfQ8CG80 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ShfQ8CG80 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ShfQ8CG80 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ShfQ8CG80 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.98■□□□□ 0.31
ShfQ8CG80 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ShfQ8CG80 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ShfQ8CG80 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ShfQ8CG80 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ShfQ8CG80 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ShfQ8CG80 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ShfQ8CG80 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms