Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Smc4Q8CG47 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Smc4Q8CG47 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Smc4Q8CG47 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Smc4Q8CG47 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Smc4Q8CG47 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Smc4Q8CG47 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Smc4Q8CG47 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Smc4Q8CG47 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Smc4Q8CG47 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Smc4Q8CG47 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Smc4Q8CG47 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Smc4Q8CG47 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.58■■□□□ 1.37
Smc4Q8CG47 Gm6420-201ENSMUST00000193885 723 ntBASIC23.58■■□□□ 1.37
Smc4Q8CG47 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Smc4Q8CG47 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Smc4Q8CG47 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Smc4Q8CG47 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Smc4Q8CG47 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Smc4Q8CG47 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Smc4Q8CG47 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Smc4Q8CG47 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC23.57■■□□□ 1.36
Smc4Q8CG47 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Smc4Q8CG47 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC23.57■■□□□ 1.36
Smc4Q8CG47 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Smc4Q8CG47 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Smc4Q8CG47 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Smc4Q8CG47 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Smc4Q8CG47 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Smc4Q8CG47 Gm7290-201ENSMUST00000104990 617 ntBASIC23.56■■□□□ 1.36
Smc4Q8CG47 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Smc4Q8CG47 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Smc4Q8CG47 Gm12918-201ENSMUST00000120234 636 ntBASIC23.56■■□□□ 1.36
Smc4Q8CG47 Gm15710-201ENSMUST00000121821 636 ntBASIC23.56■■□□□ 1.36
Smc4Q8CG47 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Smc4Q8CG47 Gm5075-201ENSMUST00000196916 622 ntBASIC23.56■■□□□ 1.36
Smc4Q8CG47 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.56■■□□□ 1.36
Smc4Q8CG47 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.56■■□□□ 1.36
Smc4Q8CG47 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.56■■□□□ 1.36
Smc4Q8CG47 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
Smc4Q8CG47 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Smc4Q8CG47 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Smc4Q8CG47 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Smc4Q8CG47 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
Smc4Q8CG47 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Smc4Q8CG47 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Smc4Q8CG47 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Smc4Q8CG47 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Smc4Q8CG47 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Smc4Q8CG47 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.54■■□□□ 1.36
Smc4Q8CG47 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Smc4Q8CG47 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Smc4Q8CG47 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Smc4Q8CG47 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Smc4Q8CG47 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Smc4Q8CG47 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Smc4Q8CG47 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc4Q8CG47 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.53■■□□□ 1.36
Smc4Q8CG47 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Smc4Q8CG47 Nespas-201ENSMUST00000143738 1083 ntBASIC23.53■■□□□ 1.36
Smc4Q8CG47 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Smc4Q8CG47 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.53■■□□□ 1.36
Smc4Q8CG47 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC23.53■■□□□ 1.36
Smc4Q8CG47 Gm6365-201ENSMUST00000054711 744 ntBASIC23.53■■□□□ 1.36
Smc4Q8CG47 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc4Q8CG47 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc4Q8CG47 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc4Q8CG47 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc4Q8CG47 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Smc4Q8CG47 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.52■■□□□ 1.36
Smc4Q8CG47 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.52■■□□□ 1.36
Smc4Q8CG47 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Smc4Q8CG47 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Smc4Q8CG47 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Smc4Q8CG47 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Smc4Q8CG47 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Smc4Q8CG47 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Smc4Q8CG47 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Smc4Q8CG47 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Smc4Q8CG47 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Smc4Q8CG47 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Smc4Q8CG47 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Smc4Q8CG47 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Smc4Q8CG47 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Smc4Q8CG47 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms