Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
4933409G03RikQ8C5U0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
4933409G03RikQ8C5U0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
4933409G03RikQ8C5U0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
4933409G03RikQ8C5U0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
4933409G03RikQ8C5U0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
4933409G03RikQ8C5U0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
4933409G03RikQ8C5U0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
4933409G03RikQ8C5U0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
4933409G03RikQ8C5U0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
4933409G03RikQ8C5U0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
4933409G03RikQ8C5U0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
4933409G03RikQ8C5U0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
4933409G03RikQ8C5U0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
4933409G03RikQ8C5U0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
4933409G03RikQ8C5U0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
4933409G03RikQ8C5U0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
4933409G03RikQ8C5U0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
4933409G03RikQ8C5U0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
4933409G03RikQ8C5U0 Gm20760-201ENSMUST00000179197 648 ntBASIC20.76■□□□□ 0.91
4933409G03RikQ8C5U0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
4933409G03RikQ8C5U0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
4933409G03RikQ8C5U0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
4933409G03RikQ8C5U0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
4933409G03RikQ8C5U0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
4933409G03RikQ8C5U0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
4933409G03RikQ8C5U0 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.73■□□□□ 0.91
4933409G03RikQ8C5U0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
4933409G03RikQ8C5U0 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.72■□□□□ 0.91
4933409G03RikQ8C5U0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
4933409G03RikQ8C5U0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
4933409G03RikQ8C5U0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.72■□□□□ 0.91
4933409G03RikQ8C5U0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.72■□□□□ 0.91
4933409G03RikQ8C5U0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
4933409G03RikQ8C5U0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
4933409G03RikQ8C5U0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
4933409G03RikQ8C5U0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
4933409G03RikQ8C5U0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
4933409G03RikQ8C5U0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
4933409G03RikQ8C5U0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
4933409G03RikQ8C5U0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms