Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chd9Q8BYH8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chd9Q8BYH8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Chd9Q8BYH8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd9Q8BYH8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd9Q8BYH8 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.23■□□□□ 0.03
Chd9Q8BYH8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd9Q8BYH8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd9Q8BYH8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd9Q8BYH8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chd9Q8BYH8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd9Q8BYH8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Gm10698-201ENSMUST00000182663 604 ntBASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.22■□□□□ 0.03
Chd9Q8BYH8 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.22■□□□□ 0.03
Chd9Q8BYH8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chd9Q8BYH8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd9Q8BYH8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.21■□□□□ 0.03
Chd9Q8BYH8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd9Q8BYH8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd9Q8BYH8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd9Q8BYH8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Chd9Q8BYH8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd9Q8BYH8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd9Q8BYH8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd9Q8BYH8 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.21■□□□□ 0.03
Chd9Q8BYH8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd9Q8BYH8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Chd9Q8BYH8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.21■□□□□ 0.02
Chd9Q8BYH8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd9Q8BYH8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd9Q8BYH8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd9Q8BYH8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd9Q8BYH8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd9Q8BYH8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd9Q8BYH8 Gm23634-201ENSMUST00000175071 91 ntBASIC15.18■□□□□ 0.02
Chd9Q8BYH8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd9Q8BYH8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd9Q8BYH8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd9Q8BYH8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd9Q8BYH8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd9Q8BYH8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd9Q8BYH8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd9Q8BYH8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd9Q8BYH8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd9Q8BYH8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd9Q8BYH8 Mir6236-201ENSMUST00000184437 123 ntBASIC15.18■□□□□ 0.02
Chd9Q8BYH8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.18■□□□□ 0.02
Chd9Q8BYH8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.18■□□□□ 0.02
Chd9Q8BYH8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd9Q8BYH8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms