Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3dQ8BX13 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Ube3dQ8BX13 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3dQ8BX13 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube3dQ8BX13 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3dQ8BX13 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3dQ8BX13 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3dQ8BX13 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3dQ8BX13 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ube3dQ8BX13 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.91■□□□□ 0.3
Ube3dQ8BX13 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.91■□□□□ 0.3
Ube3dQ8BX13 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3dQ8BX13 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Ube3dQ8BX13 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3dQ8BX13 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3dQ8BX13 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.91■□□□□ 0.3
Ube3dQ8BX13 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ube3dQ8BX13 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3dQ8BX13 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3dQ8BX13 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3dQ8BX13 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3dQ8BX13 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.9■□□□□ 0.3
Ube3dQ8BX13 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Ube3dQ8BX13 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3dQ8BX13 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ube3dQ8BX13 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Ube3dQ8BX13 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ube3dQ8BX13 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ube3dQ8BX13 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.89■□□□□ 0.3
Ube3dQ8BX13 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3dQ8BX13 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.89■□□□□ 0.29
Ube3dQ8BX13 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3dQ8BX13 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3dQ8BX13 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3dQ8BX13 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3dQ8BX13 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3dQ8BX13 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.89■□□□□ 0.29
Ube3dQ8BX13 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.89■□□□□ 0.29
Ube3dQ8BX13 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3dQ8BX13 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Ube3dQ8BX13 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3dQ8BX13 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3dQ8BX13 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ube3dQ8BX13 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Gm11421-201ENSMUST00000122124 294 ntBASIC16.88■□□□□ 0.29
Ube3dQ8BX13 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.88■□□□□ 0.29
Ube3dQ8BX13 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Gm10493-201ENSMUST00000097270 612 ntBASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube3dQ8BX13 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.86■□□□□ 0.29
Ube3dQ8BX13 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3dQ8BX13 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3dQ8BX13 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3dQ8BX13 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube3dQ8BX13 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ube3dQ8BX13 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ube3dQ8BX13 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms