Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lig4Q8BTF7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lig4Q8BTF7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lig4Q8BTF7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lig4Q8BTF7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lig4Q8BTF7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lig4Q8BTF7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lig4Q8BTF7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Lig4Q8BTF7 Gm13146-201ENSMUST00000118508 780 ntBASIC20.24■□□□□ 0.83
Lig4Q8BTF7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.24■□□□□ 0.83
Lig4Q8BTF7 Gm7514-201ENSMUST00000209475 934 ntBASIC20.24■□□□□ 0.83
Lig4Q8BTF7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.24■□□□□ 0.83
Lig4Q8BTF7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lig4Q8BTF7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lig4Q8BTF7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lig4Q8BTF7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lig4Q8BTF7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lig4Q8BTF7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.23■□□□□ 0.83
Lig4Q8BTF7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lig4Q8BTF7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lig4Q8BTF7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lig4Q8BTF7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lig4Q8BTF7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lig4Q8BTF7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lig4Q8BTF7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.22■□□□□ 0.83
Lig4Q8BTF7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lig4Q8BTF7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lig4Q8BTF7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lig4Q8BTF7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lig4Q8BTF7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lig4Q8BTF7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lig4Q8BTF7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lig4Q8BTF7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Lig4Q8BTF7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lig4Q8BTF7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lig4Q8BTF7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lig4Q8BTF7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lig4Q8BTF7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Lig4Q8BTF7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lig4Q8BTF7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lig4Q8BTF7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lig4Q8BTF7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Lig4Q8BTF7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lig4Q8BTF7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lig4Q8BTF7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Lig4Q8BTF7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lig4Q8BTF7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lig4Q8BTF7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lig4Q8BTF7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lig4Q8BTF7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lig4Q8BTF7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lig4Q8BTF7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lig4Q8BTF7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lig4Q8BTF7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Lig4Q8BTF7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lig4Q8BTF7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lig4Q8BTF7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lig4Q8BTF7 Gm37179-201ENSMUST00000194862 823 ntBASIC20.19■□□□□ 0.82
Lig4Q8BTF7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Lig4Q8BTF7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lig4Q8BTF7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.19■□□□□ 0.82
Lig4Q8BTF7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Lig4Q8BTF7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Lig4Q8BTF7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.19■□□□□ 0.82
Lig4Q8BTF7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lig4Q8BTF7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lig4Q8BTF7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lig4Q8BTF7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lig4Q8BTF7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lig4Q8BTF7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms