Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smg1Q8BKX6 Rab3c-203ENSMUST00000224180 967 ntBASIC16.41■□□□□ 0.22
Smg1Q8BKX6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smg1Q8BKX6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.41■□□□□ 0.22
Smg1Q8BKX6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smg1Q8BKX6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smg1Q8BKX6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smg1Q8BKX6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smg1Q8BKX6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smg1Q8BKX6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smg1Q8BKX6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smg1Q8BKX6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smg1Q8BKX6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smg1Q8BKX6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.39■□□□□ 0.21
Smg1Q8BKX6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smg1Q8BKX6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smg1Q8BKX6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smg1Q8BKX6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smg1Q8BKX6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smg1Q8BKX6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smg1Q8BKX6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smg1Q8BKX6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Smg1Q8BKX6 Gm25925-201ENSMUST00000158314 306 ntBASIC16.38■□□□□ 0.21
Smg1Q8BKX6 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.38■□□□□ 0.21
Smg1Q8BKX6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smg1Q8BKX6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smg1Q8BKX6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smg1Q8BKX6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smg1Q8BKX6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smg1Q8BKX6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.38■□□□□ 0.21
Smg1Q8BKX6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smg1Q8BKX6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smg1Q8BKX6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smg1Q8BKX6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smg1Q8BKX6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Smg1Q8BKX6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.37■□□□□ 0.21
Smg1Q8BKX6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smg1Q8BKX6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smg1Q8BKX6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smg1Q8BKX6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smg1Q8BKX6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.36■□□□□ 0.21
Smg1Q8BKX6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smg1Q8BKX6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Smg1Q8BKX6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Smg1Q8BKX6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smg1Q8BKX6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smg1Q8BKX6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
Smg1Q8BKX6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Smg1Q8BKX6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Smg1Q8BKX6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms