Protein–RNA interactions for Protein: Q8BJM3

R3hcc1l, Coiled-coil domain-containing protein R3HCC1L, mousemouse

Known RBP Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hcc1lQ8BJM3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hcc1lQ8BJM3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hcc1lQ8BJM3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hcc1lQ8BJM3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hcc1lQ8BJM3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hcc1lQ8BJM3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hcc1lQ8BJM3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
R3hcc1lQ8BJM3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
R3hcc1lQ8BJM3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hcc1lQ8BJM3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hcc1lQ8BJM3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hcc1lQ8BJM3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
R3hcc1lQ8BJM3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.82■□□□□ 0.6
R3hcc1lQ8BJM3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.82■□□□□ 0.6
R3hcc1lQ8BJM3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hcc1lQ8BJM3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
R3hcc1lQ8BJM3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hcc1lQ8BJM3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hcc1lQ8BJM3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hcc1lQ8BJM3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
R3hcc1lQ8BJM3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hcc1lQ8BJM3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3hcc1lQ8BJM3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hcc1lQ8BJM3 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.81■□□□□ 0.6
R3hcc1lQ8BJM3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hcc1lQ8BJM3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hcc1lQ8BJM3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
R3hcc1lQ8BJM3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3hcc1lQ8BJM3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3hcc1lQ8BJM3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
R3hcc1lQ8BJM3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.79■□□□□ 0.6
R3hcc1lQ8BJM3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3hcc1lQ8BJM3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
R3hcc1lQ8BJM3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
R3hcc1lQ8BJM3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3hcc1lQ8BJM3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
R3hcc1lQ8BJM3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3hcc1lQ8BJM3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
R3hcc1lQ8BJM3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
R3hcc1lQ8BJM3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3hcc1lQ8BJM3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3hcc1lQ8BJM3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3hcc1lQ8BJM3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3hcc1lQ8BJM3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3hcc1lQ8BJM3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3hcc1lQ8BJM3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3hcc1lQ8BJM3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.78■□□□□ 0.6
R3hcc1lQ8BJM3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
R3hcc1lQ8BJM3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3hcc1lQ8BJM3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3hcc1lQ8BJM3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.77■□□□□ 0.6
R3hcc1lQ8BJM3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3hcc1lQ8BJM3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3hcc1lQ8BJM3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.77■□□□□ 0.6
R3hcc1lQ8BJM3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
R3hcc1lQ8BJM3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
R3hcc1lQ8BJM3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
R3hcc1lQ8BJM3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
R3hcc1lQ8BJM3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
R3hcc1lQ8BJM3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3hcc1lQ8BJM3 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.76■□□□□ 0.59
R3hcc1lQ8BJM3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3hcc1lQ8BJM3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3hcc1lQ8BJM3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3hcc1lQ8BJM3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3hcc1lQ8BJM3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.76■□□□□ 0.59
R3hcc1lQ8BJM3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
R3hcc1lQ8BJM3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3hcc1lQ8BJM3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 Gm12251-201ENSMUST00000117893 792 ntBASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3hcc1lQ8BJM3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
R3hcc1lQ8BJM3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
R3hcc1lQ8BJM3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.74■□□□□ 0.59
R3hcc1lQ8BJM3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms