Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf38Q8BI21 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf38Q8BI21 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf38Q8BI21 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf38Q8BI21 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Rnf38Q8BI21 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf38Q8BI21 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rnf38Q8BI21 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf38Q8BI21 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rnf38Q8BI21 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf38Q8BI21 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf38Q8BI21 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf38Q8BI21 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.41■□□□□ 0.54
Rnf38Q8BI21 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf38Q8BI21 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf38Q8BI21 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rnf38Q8BI21 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rnf38Q8BI21 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rnf38Q8BI21 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Rnf38Q8BI21 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.41■□□□□ 0.54
Rnf38Q8BI21 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf38Q8BI21 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf38Q8BI21 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf38Q8BI21 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf38Q8BI21 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf38Q8BI21 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf38Q8BI21 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf38Q8BI21 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Rnf38Q8BI21 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf38Q8BI21 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf38Q8BI21 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Rnf38Q8BI21 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf38Q8BI21 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf38Q8BI21 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.39■□□□□ 0.53
Rnf38Q8BI21 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf38Q8BI21 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf38Q8BI21 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf38Q8BI21 Gm13241-201ENSMUST00000094493 780 ntBASIC18.39■□□□□ 0.53
Rnf38Q8BI21 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Rnf38Q8BI21 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf38Q8BI21 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf38Q8BI21 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf38Q8BI21 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf38Q8BI21 Rarb-207ENSMUST00000225921 2756 ntBASIC18.38■□□□□ 0.53
Rnf38Q8BI21 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf38Q8BI21 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf38Q8BI21 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf38Q8BI21 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf38Q8BI21 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf38Q8BI21 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf38Q8BI21 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf38Q8BI21 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf38Q8BI21 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Rnf38Q8BI21 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf38Q8BI21 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf38Q8BI21 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf38Q8BI21 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf38Q8BI21 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf38Q8BI21 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf38Q8BI21 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf38Q8BI21 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Rnf38Q8BI21 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf38Q8BI21 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf38Q8BI21 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf38Q8BI21 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf38Q8BI21 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf38Q8BI21 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf38Q8BI21 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf38Q8BI21 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.36■□□□□ 0.53
Rnf38Q8BI21 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf38Q8BI21 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.36■□□□□ 0.53
Rnf38Q8BI21 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf38Q8BI21 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf38Q8BI21 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf38Q8BI21 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf38Q8BI21 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.35■□□□□ 0.53
Rnf38Q8BI21 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf38Q8BI21 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf38Q8BI21 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf38Q8BI21 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.35■□□□□ 0.53
Rnf38Q8BI21 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf38Q8BI21 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf38Q8BI21 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf38Q8BI21 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf38Q8BI21 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf38Q8BI21 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rnf38Q8BI21 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf38Q8BI21 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms