Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn3Q8BHH8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn3Q8BHH8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn3Q8BHH8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn3Q8BHH8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn3Q8BHH8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn3Q8BHH8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clrn3Q8BHH8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.85■□□□□ 0.45
Clrn3Q8BHH8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn3Q8BHH8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn3Q8BHH8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clrn3Q8BHH8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Clrn3Q8BHH8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn3Q8BHH8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn3Q8BHH8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn3Q8BHH8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn3Q8BHH8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn3Q8BHH8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn3Q8BHH8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Clrn3Q8BHH8 Gm26833-201ENSMUST00000180899 440 ntBASIC17.84■□□□□ 0.45
Clrn3Q8BHH8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn3Q8BHH8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn3Q8BHH8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn3Q8BHH8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clrn3Q8BHH8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clrn3Q8BHH8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clrn3Q8BHH8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clrn3Q8BHH8 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.83■□□□□ 0.45
Clrn3Q8BHH8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Clrn3Q8BHH8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clrn3Q8BHH8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clrn3Q8BHH8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn3Q8BHH8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.83■□□□□ 0.44
Clrn3Q8BHH8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Clrn3Q8BHH8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.83■□□□□ 0.44
Clrn3Q8BHH8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clrn3Q8BHH8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Gm43017-201ENSMUST00000198296 752 ntBASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clrn3Q8BHH8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn3Q8BHH8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn3Q8BHH8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn3Q8BHH8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Clrn3Q8BHH8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.81■□□□□ 0.44
Clrn3Q8BHH8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn3Q8BHH8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn3Q8BHH8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn3Q8BHH8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Clrn3Q8BHH8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn3Q8BHH8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn3Q8BHH8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.81■□□□□ 0.44
Clrn3Q8BHH8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clrn3Q8BHH8 Golph3-205ENSMUST00000228671 2842 ntBASIC17.8■□□□□ 0.44
Clrn3Q8BHH8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn3Q8BHH8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn3Q8BHH8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn3Q8BHH8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.8■□□□□ 0.44
Clrn3Q8BHH8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Clrn3Q8BHH8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Clrn3Q8BHH8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.8■□□□□ 0.44
Clrn3Q8BHH8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Clrn3Q8BHH8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn3Q8BHH8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn3Q8BHH8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn3Q8BHH8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clrn3Q8BHH8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms