Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trnp1Q80ZI1 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.8■■□□□ 1.08
Trnp1Q80ZI1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trnp1Q80ZI1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Trnp1Q80ZI1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.8■■□□□ 1.08
Trnp1Q80ZI1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trnp1Q80ZI1 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.8■■□□□ 1.08
Trnp1Q80ZI1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trnp1Q80ZI1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
Trnp1Q80ZI1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trnp1Q80ZI1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trnp1Q80ZI1 Mir1199-201ENSMUST00000117015 119 ntBASIC21.79■■□□□ 1.08
Trnp1Q80ZI1 Gm15378-201ENSMUST00000121894 207 ntBASIC21.79■■□□□ 1.08
Trnp1Q80ZI1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.79■■□□□ 1.08
Trnp1Q80ZI1 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.79■■□□□ 1.08
Trnp1Q80ZI1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trnp1Q80ZI1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.79■■□□□ 1.08
Trnp1Q80ZI1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trnp1Q80ZI1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trnp1Q80ZI1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trnp1Q80ZI1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trnp1Q80ZI1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trnp1Q80ZI1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Trnp1Q80ZI1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Trnp1Q80ZI1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trnp1Q80ZI1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trnp1Q80ZI1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trnp1Q80ZI1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.78■■□□□ 1.08
Trnp1Q80ZI1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trnp1Q80ZI1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Trnp1Q80ZI1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trnp1Q80ZI1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trnp1Q80ZI1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trnp1Q80ZI1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trnp1Q80ZI1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Trnp1Q80ZI1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Trnp1Q80ZI1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trnp1Q80ZI1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trnp1Q80ZI1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trnp1Q80ZI1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trnp1Q80ZI1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.76■■□□□ 1.07
Trnp1Q80ZI1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trnp1Q80ZI1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Trnp1Q80ZI1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trnp1Q80ZI1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Trnp1Q80ZI1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trnp1Q80ZI1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trnp1Q80ZI1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trnp1Q80ZI1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trnp1Q80ZI1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trnp1Q80ZI1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trnp1Q80ZI1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trnp1Q80ZI1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trnp1Q80ZI1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trnp1Q80ZI1 Gm2399-201ENSMUST00000104944 225 ntBASIC21.74■■□□□ 1.07
Trnp1Q80ZI1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trnp1Q80ZI1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.74■■□□□ 1.07
Trnp1Q80ZI1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Trnp1Q80ZI1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.74■■□□□ 1.07
Trnp1Q80ZI1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trnp1Q80ZI1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trnp1Q80ZI1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Trnp1Q80ZI1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trnp1Q80ZI1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trnp1Q80ZI1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trnp1Q80ZI1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trnp1Q80ZI1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trnp1Q80ZI1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.73■■□□□ 1.07
Trnp1Q80ZI1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trnp1Q80ZI1 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.73■■□□□ 1.07
Trnp1Q80ZI1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Trnp1Q80ZI1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.73■■□□□ 1.07
Trnp1Q80ZI1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Trnp1Q80ZI1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trnp1Q80ZI1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trnp1Q80ZI1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.72■■□□□ 1.07
Trnp1Q80ZI1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trnp1Q80ZI1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trnp1Q80ZI1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trnp1Q80ZI1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.72■■□□□ 1.07
Trnp1Q80ZI1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trnp1Q80ZI1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms