Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.33■□□□□ 0.69
Nrde2Q80XC6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nrde2Q80XC6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.33■□□□□ 0.68
Nrde2Q80XC6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nrde2Q80XC6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nrde2Q80XC6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nrde2Q80XC6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nrde2Q80XC6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nrde2Q80XC6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nrde2Q80XC6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nrde2Q80XC6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nrde2Q80XC6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nrde2Q80XC6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nrde2Q80XC6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nrde2Q80XC6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.32■□□□□ 0.68
Nrde2Q80XC6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nrde2Q80XC6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nrde2Q80XC6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nrde2Q80XC6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nrde2Q80XC6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nrde2Q80XC6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Nrde2Q80XC6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.31■□□□□ 0.68
Nrde2Q80XC6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nrde2Q80XC6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nrde2Q80XC6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nrde2Q80XC6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nrde2Q80XC6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.31■□□□□ 0.68
Nrde2Q80XC6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nrde2Q80XC6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nrde2Q80XC6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nrde2Q80XC6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nrde2Q80XC6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nrde2Q80XC6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nrde2Q80XC6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nrde2Q80XC6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.3■□□□□ 0.68
Nrde2Q80XC6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nrde2Q80XC6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.3■□□□□ 0.68
Nrde2Q80XC6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nrde2Q80XC6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nrde2Q80XC6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nrde2Q80XC6 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.29■□□□□ 0.68
Nrde2Q80XC6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nrde2Q80XC6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nrde2Q80XC6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.29■□□□□ 0.68
Nrde2Q80XC6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nrde2Q80XC6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nrde2Q80XC6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.29■□□□□ 0.68
Nrde2Q80XC6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nrde2Q80XC6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nrde2Q80XC6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nrde2Q80XC6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nrde2Q80XC6 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.28■□□□□ 0.68
Nrde2Q80XC6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nrde2Q80XC6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nrde2Q80XC6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.28■□□□□ 0.68
Nrde2Q80XC6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Nrde2Q80XC6 Gm13146-201ENSMUST00000118508 780 ntBASIC19.28■□□□□ 0.68
Nrde2Q80XC6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nrde2Q80XC6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nrde2Q80XC6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nrde2Q80XC6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nrde2Q80XC6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nrde2Q80XC6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nrde2Q80XC6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nrde2Q80XC6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nrde2Q80XC6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nrde2Q80XC6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nrde2Q80XC6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nrde2Q80XC6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.27■□□□□ 0.68
Nrde2Q80XC6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nrde2Q80XC6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nrde2Q80XC6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nrde2Q80XC6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nrde2Q80XC6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrde2Q80XC6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nrde2Q80XC6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrde2Q80XC6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrde2Q80XC6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrde2Q80XC6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrde2Q80XC6 Gm12527-201ENSMUST00000117967 564 ntBASIC19.26■□□□□ 0.67
Nrde2Q80XC6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nrde2Q80XC6 Gm6420-201ENSMUST00000193885 723 ntBASIC19.26■□□□□ 0.67
Nrde2Q80XC6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrde2Q80XC6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrde2Q80XC6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrde2Q80XC6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Gm38205-201ENSMUST00000192243 258 ntBASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nrde2Q80XC6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms