Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Gm7290-201ENSMUST00000104990 617 ntBASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Gm12918-201ENSMUST00000120234 636 ntBASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Gm15710-201ENSMUST00000121821 636 ntBASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Gm5075-201ENSMUST00000196916 622 ntBASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf38bQ80SY5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38bQ80SY5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Prpf38bQ80SY5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38bQ80SY5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38bQ80SY5 Gm20049-201ENSMUST00000219950 730 ntBASIC19.91■□□□□ 0.78
Prpf38bQ80SY5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38bQ80SY5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf38bQ80SY5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38bQ80SY5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38bQ80SY5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38bQ80SY5 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.9■□□□□ 0.78
Prpf38bQ80SY5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38bQ80SY5 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.9■□□□□ 0.78
Prpf38bQ80SY5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.9■□□□□ 0.78
Prpf38bQ80SY5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38bQ80SY5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38bQ80SY5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38bQ80SY5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38bQ80SY5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38bQ80SY5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38bQ80SY5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Prpf38bQ80SY5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Prpf38bQ80SY5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Prpf38bQ80SY5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.89■□□□□ 0.77
Prpf38bQ80SY5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38bQ80SY5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38bQ80SY5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Prpf38bQ80SY5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38bQ80SY5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.89■□□□□ 0.77
Prpf38bQ80SY5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Prpf38bQ80SY5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.89■□□□□ 0.77
Prpf38bQ80SY5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38bQ80SY5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38bQ80SY5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38bQ80SY5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Prpf38bQ80SY5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38bQ80SY5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38bQ80SY5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38bQ80SY5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.88■□□□□ 0.77
Prpf38bQ80SY5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38bQ80SY5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Gm5408-201ENSMUST00000197998 747 ntBASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38bQ80SY5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38bQ80SY5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38bQ80SY5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38bQ80SY5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38bQ80SY5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38bQ80SY5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38bQ80SY5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38bQ80SY5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.85■□□□□ 0.77
Prpf38bQ80SY5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38bQ80SY5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Prpf38bQ80SY5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38bQ80SY5 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.85■□□□□ 0.77
Prpf38bQ80SY5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms