Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Gm7290-201ENSMUST00000104990 617 ntBASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Gm12918-201ENSMUST00000120234 636 ntBASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Gm15710-201ENSMUST00000121821 636 ntBASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Gm5075-201ENSMUST00000196916 622 ntBASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ubfd1Q78JW9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubfd1Q78JW9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ubfd1Q78JW9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ubfd1Q78JW9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.63■□□□□ 0.57
Ubfd1Q78JW9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubfd1Q78JW9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubfd1Q78JW9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubfd1Q78JW9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubfd1Q78JW9 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubfd1Q78JW9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ubfd1Q78JW9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.61■□□□□ 0.57
Ubfd1Q78JW9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubfd1Q78JW9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubfd1Q78JW9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.61■□□□□ 0.57
Ubfd1Q78JW9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.61■□□□□ 0.57
Ubfd1Q78JW9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubfd1Q78JW9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.61■□□□□ 0.57
Ubfd1Q78JW9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Ubfd1Q78JW9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubfd1Q78JW9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubfd1Q78JW9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ubfd1Q78JW9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubfd1Q78JW9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubfd1Q78JW9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubfd1Q78JW9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubfd1Q78JW9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubfd1Q78JW9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubfd1Q78JW9 Gm6365-201ENSMUST00000054711 744 ntBASIC18.6■□□□□ 0.57
Ubfd1Q78JW9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubfd1Q78JW9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubfd1Q78JW9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ubfd1Q78JW9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubfd1Q78JW9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Ubfd1Q78JW9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ubfd1Q78JW9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubfd1Q78JW9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubfd1Q78JW9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubfd1Q78JW9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
Ubfd1Q78JW9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubfd1Q78JW9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ubfd1Q78JW9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ubfd1Q78JW9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubfd1Q78JW9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ubfd1Q78JW9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubfd1Q78JW9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubfd1Q78JW9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.58■□□□□ 0.57
Ubfd1Q78JW9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubfd1Q78JW9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Ubfd1Q78JW9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.58■□□□□ 0.56
Ubfd1Q78JW9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.58■□□□□ 0.56
Ubfd1Q78JW9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubfd1Q78JW9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubfd1Q78JW9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubfd1Q78JW9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubfd1Q78JW9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubfd1Q78JW9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubfd1Q78JW9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubfd1Q78JW9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ubfd1Q78JW9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubfd1Q78JW9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubfd1Q78JW9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms