Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
Abcf1Q6P542 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Abcf1Q6P542 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.32■■□□□ 1
Abcf1Q6P542 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Abcf1Q6P542 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Abcf1Q6P542 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.32■■□□□ 1
Abcf1Q6P542 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Abcf1Q6P542 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Abcf1Q6P542 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Abcf1Q6P542 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Abcf1Q6P542 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Abcf1Q6P542 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Abcf1Q6P542 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Abcf1Q6P542 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Abcf1Q6P542 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.31■■□□□ 1
Abcf1Q6P542 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.31■■□□□ 1
Abcf1Q6P542 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Abcf1Q6P542 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Abcf1Q6P542 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Abcf1Q6P542 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Abcf1Q6P542 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.31■■□□□ 1
Abcf1Q6P542 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Abcf1Q6P542 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Abcf1Q6P542 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.31■■□□□ 1
Abcf1Q6P542 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Abcf1Q6P542 AA386476-201ENSMUST00000098781 1665 ntBASIC21.31■■□□□ 1
Abcf1Q6P542 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Abcf1Q6P542 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Abcf1Q6P542 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Abcf1Q6P542 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.3■■□□□ 1
Abcf1Q6P542 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Abcf1Q6P542 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Abcf1Q6P542 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.3■■□□□ 1
Abcf1Q6P542 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.29■■□□□ 1
Abcf1Q6P542 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcf1Q6P542 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcf1Q6P542 Gm43137-201ENSMUST00000198052 594 ntBASIC21.29■■□□□ 1
Abcf1Q6P542 Gm45417-201ENSMUST00000209533 758 ntBASIC21.29■■□□□ 1
Abcf1Q6P542 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.29■■□□□ 1
Abcf1Q6P542 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.29■■□□□ 1
Abcf1Q6P542 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Abcf1Q6P542 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Abcf1Q6P542 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcf1Q6P542 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Abcf1Q6P542 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcf1Q6P542 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcf1Q6P542 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Abcf1Q6P542 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Abcf1Q6P542 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Abcf1Q6P542 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Abcf1Q6P542 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.28■■□□□ 1
Abcf1Q6P542 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.28■■□□□ 1
Abcf1Q6P542 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.28■■□□□ 1
Abcf1Q6P542 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Abcf1Q6P542 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Abcf1Q6P542 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Abcf1Q6P542 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Abcf1Q6P542 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.28■■□□□ 1
Abcf1Q6P542 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.28■■□□□ 1
Abcf1Q6P542 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Abcf1Q6P542 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Abcf1Q6P542 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Abcf1Q6P542 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.27■■□□□ 1
Abcf1Q6P542 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.27■■□□□ 1
Abcf1Q6P542 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Abcf1Q6P542 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Abcf1Q6P542 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Abcf1Q6P542 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.27■□□□□ 0.99
Abcf1Q6P542 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.26■□□□□ 0.99
Abcf1Q6P542 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.26■□□□□ 0.99
Abcf1Q6P542 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Abcf1Q6P542 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Abcf1Q6P542 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Abcf1Q6P542 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Abcf1Q6P542 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Abcf1Q6P542 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Abcf1Q6P542 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Abcf1Q6P542 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Abcf1Q6P542 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Abcf1Q6P542 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Abcf1Q6P542 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Abcf1Q6P542 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Abcf1Q6P542 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Abcf1Q6P542 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Abcf1Q6P542 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms