Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sim1Q61045 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sim1Q61045 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.99■□□□□ 0.63
Sim1Q61045 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.99■□□□□ 0.63
Sim1Q61045 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Sim1Q61045 Gm4968-201ENSMUST00000071458 858 ntBASIC18.99■□□□□ 0.63
Sim1Q61045 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.99■□□□□ 0.63
Sim1Q61045 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sim1Q61045 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Sim1Q61045 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sim1Q61045 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sim1Q61045 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sim1Q61045 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sim1Q61045 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sim1Q61045 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sim1Q61045 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Sim1Q61045 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.98■□□□□ 0.63
Sim1Q61045 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sim1Q61045 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sim1Q61045 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sim1Q61045 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sim1Q61045 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sim1Q61045 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Sim1Q61045 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sim1Q61045 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sim1Q61045 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.97■□□□□ 0.63
Sim1Q61045 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.97■□□□□ 0.63
Sim1Q61045 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sim1Q61045 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sim1Q61045 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sim1Q61045 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sim1Q61045 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Sim1Q61045 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Sim1Q61045 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sim1Q61045 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.96■□□□□ 0.63
Sim1Q61045 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sim1Q61045 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sim1Q61045 AA386476-201ENSMUST00000098781 1665 ntBASIC18.96■□□□□ 0.63
Sim1Q61045 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sim1Q61045 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Sim1Q61045 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sim1Q61045 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sim1Q61045 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.96■□□□□ 0.63
Sim1Q61045 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.96■□□□□ 0.63
Sim1Q61045 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sim1Q61045 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sim1Q61045 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sim1Q61045 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sim1Q61045 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sim1Q61045 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim1Q61045 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim1Q61045 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim1Q61045 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim1Q61045 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim1Q61045 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim1Q61045 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Sim1Q61045 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim1Q61045 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Sim1Q61045 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim1Q61045 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Sim1Q61045 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sim1Q61045 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sim1Q61045 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Sim1Q61045 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sim1Q61045 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
Sim1Q61045 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sim1Q61045 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sim1Q61045 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sim1Q61045 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sim1Q61045 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sim1Q61045 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sim1Q61045 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sim1Q61045 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.93■□□□□ 0.62
Sim1Q61045 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.93■□□□□ 0.62
Sim1Q61045 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sim1Q61045 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim1Q61045 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim1Q61045 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim1Q61045 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim1Q61045 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim1Q61045 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim1Q61045 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim1Q61045 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim1Q61045 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sim1Q61045 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sim1Q61045 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.92■□□□□ 0.62
Sim1Q61045 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Sim1Q61045 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sim1Q61045 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.92■□□□□ 0.62
Sim1Q61045 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sim1Q61045 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sim1Q61045 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sim1Q61045 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.91■□□□□ 0.62
Sim1Q61045 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sim1Q61045 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sim1Q61045 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sim1Q61045 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sim1Q61045 Gm12527-201ENSMUST00000117967 564 ntBASIC18.91■□□□□ 0.62
Sim1Q61045 Gm27801-201ENSMUST00000184174 223 ntBASIC18.91■□□□□ 0.62
Sim1Q61045 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms