Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a4Q60857 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a4Q60857 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a4Q60857 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Slc6a4Q60857 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Slc6a4Q60857 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a4Q60857 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.65■□□□□ 0.74
Slc6a4Q60857 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.65■□□□□ 0.74
Slc6a4Q60857 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a4Q60857 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc6a4Q60857 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc6a4Q60857 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc6a4Q60857 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a4Q60857 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a4Q60857 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.64■□□□□ 0.73
Slc6a4Q60857 Gm6420-201ENSMUST00000193885 723 ntBASIC19.64■□□□□ 0.73
Slc6a4Q60857 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Slc6a4Q60857 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Slc6a4Q60857 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Slc6a4Q60857 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a4Q60857 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a4Q60857 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a4Q60857 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a4Q60857 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a4Q60857 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Slc6a4Q60857 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a4Q60857 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a4Q60857 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a4Q60857 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a4Q60857 Nespas-201ENSMUST00000143738 1083 ntBASIC19.63■□□□□ 0.73
Slc6a4Q60857 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.63■□□□□ 0.73
Slc6a4Q60857 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a4Q60857 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a4Q60857 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
Slc6a4Q60857 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a4Q60857 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Slc6a4Q60857 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.62■□□□□ 0.73
Slc6a4Q60857 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a4Q60857 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a4Q60857 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.62■□□□□ 0.73
Slc6a4Q60857 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a4Q60857 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a4Q60857 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a4Q60857 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.61■□□□□ 0.73
Slc6a4Q60857 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a4Q60857 Gm12933-201ENSMUST00000120203 872 ntBASIC19.61■□□□□ 0.73
Slc6a4Q60857 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a4Q60857 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a4Q60857 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Slc6a4Q60857 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Slc6a4Q60857 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a4Q60857 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a4Q60857 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a4Q60857 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Slc6a4Q60857 Gm10602-201ENSMUST00000098239 609 ntBASIC19.6■□□□□ 0.73
Slc6a4Q60857 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a4Q60857 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a4Q60857 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a4Q60857 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a4Q60857 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a4Q60857 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a4Q60857 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a4Q60857 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a4Q60857 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a4Q60857 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.59■□□□□ 0.73
Slc6a4Q60857 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.59■□□□□ 0.73
Slc6a4Q60857 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a4Q60857 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a4Q60857 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a4Q60857 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a4Q60857 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a4Q60857 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc6a4Q60857 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Slc6a4Q60857 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc6a4Q60857 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a4Q60857 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Slc6a4Q60857 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a4Q60857 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.58■□□□□ 0.72
Slc6a4Q60857 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a4Q60857 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a4Q60857 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Slc6a4Q60857 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a4Q60857 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a4Q60857 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a4Q60857 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a4Q60857 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.57■□□□□ 0.72
Slc6a4Q60857 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a4Q60857 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms