Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lin28bQ45KJ6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lin28bQ45KJ6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Lin28bQ45KJ6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lin28bQ45KJ6 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.2■□□□□ 0.5
Lin28bQ45KJ6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lin28bQ45KJ6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lin28bQ45KJ6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lin28bQ45KJ6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lin28bQ45KJ6 Gm12441-201ENSMUST00000121806 588 ntBASIC18.19■□□□□ 0.5
Lin28bQ45KJ6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Lin28bQ45KJ6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Lin28bQ45KJ6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lin28bQ45KJ6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lin28bQ45KJ6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lin28bQ45KJ6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.19■□□□□ 0.5
Lin28bQ45KJ6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Lin28bQ45KJ6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lin28bQ45KJ6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lin28bQ45KJ6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lin28bQ45KJ6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.18■□□□□ 0.5
Lin28bQ45KJ6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.18■□□□□ 0.5
Lin28bQ45KJ6 Gm13148-201ENSMUST00000118892 745 ntBASIC18.18■□□□□ 0.5
Lin28bQ45KJ6 Gm13534-201ENSMUST00000121169 513 ntBASIC18.18■□□□□ 0.5
Lin28bQ45KJ6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.18■□□□□ 0.5
Lin28bQ45KJ6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.18■□□□□ 0.5
Lin28bQ45KJ6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lin28bQ45KJ6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Lin28bQ45KJ6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lin28bQ45KJ6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Lin28bQ45KJ6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lin28bQ45KJ6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lin28bQ45KJ6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lin28bQ45KJ6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lin28bQ45KJ6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lin28bQ45KJ6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Lin28bQ45KJ6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.17■□□□□ 0.5
Lin28bQ45KJ6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lin28bQ45KJ6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lin28bQ45KJ6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.17■□□□□ 0.5
Lin28bQ45KJ6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lin28bQ45KJ6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 Gm4968-201ENSMUST00000071458 858 ntBASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lin28bQ45KJ6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Gm10653-202ENSMUST00000139570 835 ntBASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Lin28bQ45KJ6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lin28bQ45KJ6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lin28bQ45KJ6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Lin28bQ45KJ6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lin28bQ45KJ6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lin28bQ45KJ6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.14■□□□□ 0.49
Lin28bQ45KJ6 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.14■□□□□ 0.49
Lin28bQ45KJ6 Gm7860-201ENSMUST00000121190 879 ntBASIC18.14■□□□□ 0.49
Lin28bQ45KJ6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lin28bQ45KJ6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lin28bQ45KJ6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lin28bQ45KJ6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lin28bQ45KJ6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lin28bQ45KJ6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lin28bQ45KJ6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Lin28bQ45KJ6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lin28bQ45KJ6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lin28bQ45KJ6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Lin28bQ45KJ6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Lin28bQ45KJ6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.13■□□□□ 0.49
Lin28bQ45KJ6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lin28bQ45KJ6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lin28bQ45KJ6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lin28bQ45KJ6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Lin28bQ45KJ6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 134.9 ms