Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Usp30Q3UN04 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp30Q3UN04 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Usp30Q3UN04 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp30Q3UN04 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp30Q3UN04 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Usp30Q3UN04 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.25■□□□□ 0.67
Usp30Q3UN04 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp30Q3UN04 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp30Q3UN04 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp30Q3UN04 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp30Q3UN04 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp30Q3UN04 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp30Q3UN04 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Usp30Q3UN04 Gm5408-201ENSMUST00000197998 747 ntBASIC19.24■□□□□ 0.67
Usp30Q3UN04 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp30Q3UN04 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp30Q3UN04 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp30Q3UN04 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp30Q3UN04 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp30Q3UN04 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp30Q3UN04 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp30Q3UN04 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp30Q3UN04 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp30Q3UN04 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Usp30Q3UN04 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.23■□□□□ 0.67
Usp30Q3UN04 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Usp30Q3UN04 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp30Q3UN04 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.23■□□□□ 0.67
Usp30Q3UN04 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Usp30Q3UN04 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp30Q3UN04 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.23■□□□□ 0.67
Usp30Q3UN04 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp30Q3UN04 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp30Q3UN04 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp30Q3UN04 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Usp30Q3UN04 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp30Q3UN04 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp30Q3UN04 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp30Q3UN04 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp30Q3UN04 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp30Q3UN04 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.22■□□□□ 0.67
Usp30Q3UN04 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp30Q3UN04 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp30Q3UN04 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp30Q3UN04 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp30Q3UN04 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp30Q3UN04 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.21■□□□□ 0.67
Usp30Q3UN04 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.21■□□□□ 0.67
Usp30Q3UN04 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp30Q3UN04 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.21■□□□□ 0.67
Usp30Q3UN04 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Usp30Q3UN04 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp30Q3UN04 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp30Q3UN04 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Usp30Q3UN04 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp30Q3UN04 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp30Q3UN04 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.2■□□□□ 0.66
Usp30Q3UN04 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Usp30Q3UN04 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp30Q3UN04 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp30Q3UN04 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Usp30Q3UN04 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp30Q3UN04 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp30Q3UN04 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp30Q3UN04 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp30Q3UN04 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Usp30Q3UN04 Gm10653-202ENSMUST00000139570 835 ntBASIC19.19■□□□□ 0.66
Usp30Q3UN04 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp30Q3UN04 Gm20760-201ENSMUST00000179197 648 ntBASIC19.19■□□□□ 0.66
Usp30Q3UN04 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp30Q3UN04 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp30Q3UN04 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.19■□□□□ 0.66
Usp30Q3UN04 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Usp30Q3UN04 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp30Q3UN04 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp30Q3UN04 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp30Q3UN04 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp30Q3UN04 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp30Q3UN04 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Usp30Q3UN04 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp30Q3UN04 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.18■□□□□ 0.66
Usp30Q3UN04 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Usp30Q3UN04 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp30Q3UN04 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.18■□□□□ 0.66
Usp30Q3UN04 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp30Q3UN04 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp30Q3UN04 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp30Q3UN04 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp30Q3UN04 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp30Q3UN04 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp30Q3UN04 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp30Q3UN04 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp30Q3UN04 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Usp30Q3UN04 Gm12527-201ENSMUST00000117967 564 ntBASIC19.17■□□□□ 0.66
Usp30Q3UN04 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.17■□□□□ 0.66
Usp30Q3UN04 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp30Q3UN04 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp30Q3UN04 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Usp30Q3UN04 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms