Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Shroom4Q1W617 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Shroom4Q1W617 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Shroom4Q1W617 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Shroom4Q1W617 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Shroom4Q1W617 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC30.71■■■□□ 2.51
Shroom4Q1W617 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
Shroom4Q1W617 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Shroom4Q1W617 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Shroom4Q1W617 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Shroom4Q1W617 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Shroom4Q1W617 Gm11249-201ENSMUST00000117071 859 ntBASIC30.7■■■□□ 2.51
Shroom4Q1W617 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Shroom4Q1W617 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Shroom4Q1W617 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Shroom4Q1W617 Gm43672-201ENSMUST00000199072 1731 ntBASIC30.7■■■□□ 2.51
Shroom4Q1W617 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Shroom4Q1W617 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC30.7■■■□□ 2.5
Shroom4Q1W617 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC30.7■■■□□ 2.5
Shroom4Q1W617 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Shroom4Q1W617 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Shroom4Q1W617 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC30.69■■■□□ 2.5
Shroom4Q1W617 Gm10698-201ENSMUST00000182663 604 ntBASIC30.69■■■□□ 2.5
Shroom4Q1W617 Gm44549-201ENSMUST00000208351 577 ntBASIC30.69■■■□□ 2.5
Shroom4Q1W617 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Shroom4Q1W617 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Shroom4Q1W617 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
Shroom4Q1W617 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Shroom4Q1W617 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Shroom4Q1W617 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Shroom4Q1W617 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Shroom4Q1W617 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC30.67■■■□□ 2.5
Shroom4Q1W617 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Shroom4Q1W617 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Shroom4Q1W617 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
Shroom4Q1W617 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Shroom4Q1W617 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Shroom4Q1W617 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Shroom4Q1W617 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Shroom4Q1W617 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Shroom4Q1W617 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC30.66■■■□□ 2.5
Shroom4Q1W617 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC30.66■■■□□ 2.5
Shroom4Q1W617 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Shroom4Q1W617 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Shroom4Q1W617 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Shroom4Q1W617 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC30.65■■■□□ 2.5
Shroom4Q1W617 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Shroom4Q1W617 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Shroom4Q1W617 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Shroom4Q1W617 Gm13042-201ENSMUST00000119244 1955 ntBASIC30.65■■■□□ 2.5
Shroom4Q1W617 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC30.64■■■□□ 2.5
Shroom4Q1W617 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Shroom4Q1W617 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Shroom4Q1W617 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Shroom4Q1W617 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Shroom4Q1W617 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.49
Shroom4Q1W617 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Shroom4Q1W617 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Shroom4Q1W617 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC30.64■■■□□ 2.49
Shroom4Q1W617 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Shroom4Q1W617 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Shroom4Q1W617 Gm22325-201ENSMUST00000158904 308 ntBASIC30.63■■■□□ 2.49
Shroom4Q1W617 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Shroom4Q1W617 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Shroom4Q1W617 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Shroom4Q1W617 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Shroom4Q1W617 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Shroom4Q1W617 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC30.63■■■□□ 2.49
Shroom4Q1W617 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Shroom4Q1W617 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Shroom4Q1W617 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC30.62■■■□□ 2.49
Shroom4Q1W617 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Shroom4Q1W617 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Shroom4Q1W617 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Shroom4Q1W617 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Shroom4Q1W617 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Shroom4Q1W617 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Shroom4Q1W617 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Shroom4Q1W617 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC30.61■■■□□ 2.49
Shroom4Q1W617 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Shroom4Q1W617 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
Shroom4Q1W617 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Shroom4Q1W617 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
Shroom4Q1W617 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC30.6■■■□□ 2.49
Shroom4Q1W617 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
Shroom4Q1W617 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Shroom4Q1W617 Gm715-201ENSMUST00000117865 831 ntBASIC30.6■■■□□ 2.49
Shroom4Q1W617 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Shroom4Q1W617 Gm2399-201ENSMUST00000104944 225 ntBASIC30.59■■■□□ 2.49
Shroom4Q1W617 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Shroom4Q1W617 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
Shroom4Q1W617 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Shroom4Q1W617 Gm19094-201ENSMUST00000209791 1246 ntBASIC30.58■■■□□ 2.49
Shroom4Q1W617 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Shroom4Q1W617 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Shroom4Q1W617 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
Shroom4Q1W617 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Shroom4Q1W617 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Shroom4Q1W617 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC30.57■■■□□ 2.48
Shroom4Q1W617 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC30.57■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms