Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd8Q09XV5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd8Q09XV5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd8Q09XV5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd8Q09XV5 Gm6623-201ENSMUST00000173570 544 ntBASIC17.37■□□□□ 0.37
Chd8Q09XV5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd8Q09XV5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd8Q09XV5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd8Q09XV5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.36■□□□□ 0.37
Chd8Q09XV5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Chd8Q09XV5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd8Q09XV5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Chd8Q09XV5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.36■□□□□ 0.37
Chd8Q09XV5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chd8Q09XV5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chd8Q09XV5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.36■□□□□ 0.37
Chd8Q09XV5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd8Q09XV5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd8Q09XV5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Chd8Q09XV5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Chd8Q09XV5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd8Q09XV5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Gm12382-201ENSMUST00000122005 922 ntBASIC17.35■□□□□ 0.37
Chd8Q09XV5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd8Q09XV5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.35■□□□□ 0.37
Chd8Q09XV5 Gm5186-201ENSMUST00000218781 920 ntBASIC17.35■□□□□ 0.37
Chd8Q09XV5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Chd8Q09XV5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd8Q09XV5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Chd8Q09XV5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd8Q09XV5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd8Q09XV5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd8Q09XV5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd8Q09XV5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd8Q09XV5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd8Q09XV5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd8Q09XV5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Chd8Q09XV5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd8Q09XV5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd8Q09XV5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd8Q09XV5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.33■□□□□ 0.36
Chd8Q09XV5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.33■□□□□ 0.36
Chd8Q09XV5 Gm17807-201ENSMUST00000186869 298 ntBASIC17.33■□□□□ 0.36
Chd8Q09XV5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd8Q09XV5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chd8Q09XV5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd8Q09XV5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chd8Q09XV5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd8Q09XV5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd8Q09XV5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd8Q09XV5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chd8Q09XV5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.33■□□□□ 0.36
Chd8Q09XV5 Gm42545-201ENSMUST00000202755 922 ntBASIC17.33■□□□□ 0.36
Chd8Q09XV5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.33■□□□□ 0.36
Chd8Q09XV5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd8Q09XV5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd8Q09XV5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd8Q09XV5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd8Q09XV5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd8Q09XV5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd8Q09XV5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd8Q09XV5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd8Q09XV5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd8Q09XV5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.32■□□□□ 0.36
Chd8Q09XV5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chd8Q09XV5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chd8Q09XV5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd8Q09XV5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd8Q09XV5 Gm18959-201ENSMUST00000208954 655 ntBASIC17.32■□□□□ 0.36
Chd8Q09XV5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd8Q09XV5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd8Q09XV5 Gm18669-201ENSMUST00000216049 778 ntBASIC17.31■□□□□ 0.36
Chd8Q09XV5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.31■□□□□ 0.36
Chd8Q09XV5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd8Q09XV5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.3■□□□□ 0.36
Chd8Q09XV5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd8Q09XV5 Gm18958-201ENSMUST00000174258 762 ntBASIC17.3■□□□□ 0.36
Chd8Q09XV5 Gm27704-201ENSMUST00000185094 107 ntBASIC17.3■□□□□ 0.36
Chd8Q09XV5 Gm45058-201ENSMUST00000205810 766 ntBASIC17.3■□□□□ 0.36
Chd8Q09XV5 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.3■□□□□ 0.36
Chd8Q09XV5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Chd8Q09XV5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd8Q09XV5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd8Q09XV5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd8Q09XV5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd8Q09XV5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd8Q09XV5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms