Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.8■□□□□ 0.92
CiitaP79621 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.8■□□□□ 0.92
CiitaP79621 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CiitaP79621 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CiitaP79621 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CiitaP79621 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CiitaP79621 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CiitaP79621 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CiitaP79621 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CiitaP79621 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CiitaP79621 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CiitaP79621 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CiitaP79621 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CiitaP79621 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CiitaP79621 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CiitaP79621 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CiitaP79621 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CiitaP79621 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CiitaP79621 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CiitaP79621 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.78■□□□□ 0.92
CiitaP79621 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.78■□□□□ 0.92
CiitaP79621 Gm6420-201ENSMUST00000193885 723 ntBASIC20.78■□□□□ 0.92
CiitaP79621 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.78■□□□□ 0.92
CiitaP79621 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CiitaP79621 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CiitaP79621 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CiitaP79621 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CiitaP79621 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CiitaP79621 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CiitaP79621 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CiitaP79621 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.77■□□□□ 0.92
CiitaP79621 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.77■□□□□ 0.92
CiitaP79621 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CiitaP79621 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CiitaP79621 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
CiitaP79621 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CiitaP79621 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CiitaP79621 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CiitaP79621 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CiitaP79621 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CiitaP79621 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CiitaP79621 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CiitaP79621 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CiitaP79621 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CiitaP79621 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CiitaP79621 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CiitaP79621 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CiitaP79621 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CiitaP79621 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CiitaP79621 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CiitaP79621 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CiitaP79621 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CiitaP79621 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CiitaP79621 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CiitaP79621 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CiitaP79621 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CiitaP79621 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CiitaP79621 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.75■□□□□ 0.91
CiitaP79621 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CiitaP79621 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CiitaP79621 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.75■□□□□ 0.91
CiitaP79621 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CiitaP79621 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CiitaP79621 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CiitaP79621 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CiitaP79621 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CiitaP79621 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CiitaP79621 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CiitaP79621 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.74■□□□□ 0.91
CiitaP79621 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CiitaP79621 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CiitaP79621 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CiitaP79621 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.74■□□□□ 0.91
CiitaP79621 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CiitaP79621 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CiitaP79621 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CiitaP79621 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CiitaP79621 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
CiitaP79621 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CiitaP79621 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
CiitaP79621 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CiitaP79621 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CiitaP79621 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CiitaP79621 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CiitaP79621 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CiitaP79621 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CiitaP79621 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CiitaP79621 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CiitaP79621 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CiitaP79621 Nespas-201ENSMUST00000143738 1083 ntBASIC20.72■□□□□ 0.91
CiitaP79621 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CiitaP79621 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CiitaP79621 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CiitaP79621 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CiitaP79621 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CiitaP79621 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CiitaP79621 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CiitaP79621 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CiitaP79621 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CiitaP79621 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms