Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ybx1P62960 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ybx1P62960 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ybx1P62960 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ybx1P62960 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ybx1P62960 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ybx1P62960 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ybx1P62960 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ybx1P62960 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ybx1P62960 Gm10252-201ENSMUST00000209541 832 ntBASIC19.67■□□□□ 0.74
Ybx1P62960 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ybx1P62960 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ybx1P62960 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ybx1P62960 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ybx1P62960 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ybx1P62960 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ybx1P62960 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ybx1P62960 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ybx1P62960 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ybx1P62960 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ybx1P62960 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ybx1P62960 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ybx1P62960 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ybx1P62960 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ybx1P62960 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.66■□□□□ 0.74
Ybx1P62960 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ybx1P62960 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ybx1P62960 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ybx1P62960 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ybx1P62960 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ybx1P62960 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ybx1P62960 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ybx1P62960 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ybx1P62960 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ybx1P62960 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ybx1P62960 Gm7860-201ENSMUST00000121190 879 ntBASIC19.65■□□□□ 0.74
Ybx1P62960 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.65■□□□□ 0.74
Ybx1P62960 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ybx1P62960 Gm8520-201ENSMUST00000186517 868 ntBASIC19.65■□□□□ 0.74
Ybx1P62960 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ybx1P62960 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ybx1P62960 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ybx1P62960 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ybx1P62960 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ybx1P62960 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ybx1P62960 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ybx1P62960 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ybx1P62960 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ybx1P62960 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.64■□□□□ 0.74
Ybx1P62960 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ybx1P62960 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.64■□□□□ 0.73
Ybx1P62960 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.64■□□□□ 0.73
Ybx1P62960 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ybx1P62960 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ybx1P62960 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ybx1P62960 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ybx1P62960 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Ybx1P62960 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.63■□□□□ 0.73
Ybx1P62960 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ybx1P62960 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ybx1P62960 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ybx1P62960 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ybx1P62960 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ybx1P62960 Gm13168-201ENSMUST00000121771 632 ntBASIC19.63■□□□□ 0.73
Ybx1P62960 Gm37856-201ENSMUST00000191634 999 ntBASIC19.63■□□□□ 0.73
Ybx1P62960 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.63■□□□□ 0.73
Ybx1P62960 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.63■□□□□ 0.73
Ybx1P62960 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.63■□□□□ 0.73
Ybx1P62960 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ybx1P62960 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ybx1P62960 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ybx1P62960 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ybx1P62960 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ybx1P62960 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.62■□□□□ 0.73
Ybx1P62960 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ybx1P62960 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ybx1P62960 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ybx1P62960 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.62■□□□□ 0.73
Ybx1P62960 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ybx1P62960 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ybx1P62960 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ybx1P62960 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ybx1P62960 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ybx1P62960 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ybx1P62960 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ybx1P62960 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ybx1P62960 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ybx1P62960 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ybx1P62960 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Ybx1P62960 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ybx1P62960 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.61■□□□□ 0.73
Ybx1P62960 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ybx1P62960 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ybx1P62960 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ybx1P62960 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ybx1P62960 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.61■□□□□ 0.73
Ybx1P62960 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.61■□□□□ 0.73
Ybx1P62960 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Ybx1P62960 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ybx1P62960 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms