Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SmoP56726 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.29■□□□□ 0.68
SmoP56726 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.29■□□□□ 0.68
SmoP56726 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SmoP56726 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SmoP56726 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SmoP56726 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SmoP56726 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.28■□□□□ 0.68
SmoP56726 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SmoP56726 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SmoP56726 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.28■□□□□ 0.68
SmoP56726 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SmoP56726 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SmoP56726 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SmoP56726 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SmoP56726 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SmoP56726 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.28■□□□□ 0.68
SmoP56726 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.28■□□□□ 0.68
SmoP56726 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SmoP56726 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.28■□□□□ 0.68
SmoP56726 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SmoP56726 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SmoP56726 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SmoP56726 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SmoP56726 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SmoP56726 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SmoP56726 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SmoP56726 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SmoP56726 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SmoP56726 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SmoP56726 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.27■□□□□ 0.68
SmoP56726 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.27■□□□□ 0.68
SmoP56726 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SmoP56726 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SmoP56726 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SmoP56726 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SmoP56726 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.26■□□□□ 0.67
SmoP56726 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.26■□□□□ 0.67
SmoP56726 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SmoP56726 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SmoP56726 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SmoP56726 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SmoP56726 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
SmoP56726 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SmoP56726 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SmoP56726 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SmoP56726 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SmoP56726 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SmoP56726 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SmoP56726 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SmoP56726 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SmoP56726 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SmoP56726 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SmoP56726 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SmoP56726 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SmoP56726 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SmoP56726 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SmoP56726 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SmoP56726 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.24■□□□□ 0.67
SmoP56726 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SmoP56726 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SmoP56726 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SmoP56726 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SmoP56726 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SmoP56726 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.24■□□□□ 0.67
SmoP56726 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SmoP56726 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SmoP56726 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SmoP56726 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SmoP56726 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
SmoP56726 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SmoP56726 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.23■□□□□ 0.67
SmoP56726 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.23■□□□□ 0.67
SmoP56726 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SmoP56726 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SmoP56726 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SmoP56726 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SmoP56726 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SmoP56726 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SmoP56726 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SmoP56726 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.22■□□□□ 0.67
SmoP56726 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
SmoP56726 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SmoP56726 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SmoP56726 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SmoP56726 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SmoP56726 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.22■□□□□ 0.67
SmoP56726 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms