Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6bP23440 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Pde6bP23440 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pde6bP23440 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.79■□□□□ 0.92
Pde6bP23440 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6bP23440 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pde6bP23440 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6bP23440 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pde6bP23440 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pde6bP23440 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pde6bP23440 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pde6bP23440 Gm7290-201ENSMUST00000104990 617 ntBASIC20.78■□□□□ 0.92
Pde6bP23440 Gm12918-201ENSMUST00000120234 636 ntBASIC20.78■□□□□ 0.92
Pde6bP23440 Gm15710-201ENSMUST00000121821 636 ntBASIC20.78■□□□□ 0.92
Pde6bP23440 Gm5075-201ENSMUST00000196916 622 ntBASIC20.78■□□□□ 0.92
Pde6bP23440 Gm4968-201ENSMUST00000071458 858 ntBASIC20.78■□□□□ 0.92
Pde6bP23440 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.78■□□□□ 0.92
Pde6bP23440 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.78■□□□□ 0.92
Pde6bP23440 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pde6bP23440 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.78■□□□□ 0.92
Pde6bP23440 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pde6bP23440 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6bP23440 Golph3-202ENSMUST00000226517 2359 ntBASIC20.77■□□□□ 0.92
Pde6bP23440 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.77■□□□□ 0.92
Pde6bP23440 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Pde6bP23440 Gm6365-201ENSMUST00000054711 744 ntBASIC20.77■□□□□ 0.92
Pde6bP23440 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6bP23440 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6bP23440 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6bP23440 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6bP23440 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6bP23440 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6bP23440 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.77■□□□□ 0.91
Pde6bP23440 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pde6bP23440 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6bP23440 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6bP23440 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.76■□□□□ 0.91
Pde6bP23440 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6bP23440 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Pde6bP23440 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6bP23440 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.76■□□□□ 0.91
Pde6bP23440 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6bP23440 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6bP23440 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6bP23440 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6bP23440 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6bP23440 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.75■□□□□ 0.91
Pde6bP23440 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.75■□□□□ 0.91
Pde6bP23440 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.75■□□□□ 0.91
Pde6bP23440 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Pde6bP23440 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Pde6bP23440 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.75■□□□□ 0.91
Pde6bP23440 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6bP23440 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.75■□□□□ 0.91
Pde6bP23440 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6bP23440 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6bP23440 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6bP23440 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pde6bP23440 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Pde6bP23440 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6bP23440 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.74■□□□□ 0.91
Pde6bP23440 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6bP23440 Gm6420-201ENSMUST00000193885 723 ntBASIC20.74■□□□□ 0.91
Pde6bP23440 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.74■□□□□ 0.91
Pde6bP23440 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.74■□□□□ 0.91
Pde6bP23440 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.74■□□□□ 0.91
Pde6bP23440 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6bP23440 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6bP23440 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6bP23440 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6bP23440 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Pde6bP23440 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pde6bP23440 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6bP23440 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pde6bP23440 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6bP23440 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6bP23440 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Pde6bP23440 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.73■□□□□ 0.91
Pde6bP23440 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6bP23440 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6bP23440 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6bP23440 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pde6bP23440 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6bP23440 Gm13534-201ENSMUST00000121169 513 ntBASIC20.72■□□□□ 0.91
Pde6bP23440 Nespas-201ENSMUST00000143738 1083 ntBASIC20.72■□□□□ 0.91
Pde6bP23440 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.72■□□□□ 0.91
Pde6bP23440 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6bP23440 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.72■□□□□ 0.91
Pde6bP23440 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6bP23440 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6bP23440 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6bP23440 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6bP23440 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.72■□□□□ 0.91
Pde6bP23440 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pde6bP23440 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.71■□□□□ 0.91
Pde6bP23440 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Pde6bP23440 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pde6bP23440 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pde6bP23440 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.71■□□□□ 0.91
Pde6bP23440 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms