Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm45417-201ENSMUST00000209533 758 ntBASIC17.68■□□□□ 0.42
Clk1P22518 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Clk1P22518 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clk1P22518 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clk1P22518 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clk1P22518 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clk1P22518 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.67■□□□□ 0.42
Clk1P22518 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Clk1P22518 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Clk1P22518 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk1P22518 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.67■□□□□ 0.42
Clk1P22518 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Clk1P22518 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk1P22518 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.67■□□□□ 0.42
Clk1P22518 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk1P22518 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk1P22518 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk1P22518 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clk1P22518 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Clk1P22518 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Clk1P22518 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Clk1P22518 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clk1P22518 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.66■□□□□ 0.42
Clk1P22518 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk1P22518 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clk1P22518 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clk1P22518 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clk1P22518 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clk1P22518 Smad6-203ENSMUST00000179458 273 ntBASIC17.66■□□□□ 0.42
Clk1P22518 Serp2-204ENSMUST00000228055 705 ntBASIC17.66■□□□□ 0.42
Clk1P22518 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.66■□□□□ 0.42
Clk1P22518 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Clk1P22518 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Clk1P22518 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Clk1P22518 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk1P22518 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk1P22518 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clk1P22518 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk1P22518 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk1P22518 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk1P22518 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk1P22518 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.65■□□□□ 0.42
Clk1P22518 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk1P22518 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Clk1P22518 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clk1P22518 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clk1P22518 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk1P22518 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk1P22518 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk1P22518 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk1P22518 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.65■□□□□ 0.42
Clk1P22518 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clk1P22518 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk1P22518 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk1P22518 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.64■□□□□ 0.41
Clk1P22518 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clk1P22518 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.64■□□□□ 0.41
Clk1P22518 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk1P22518 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk1P22518 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Clk1P22518 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clk1P22518 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk1P22518 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk1P22518 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk1P22518 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk1P22518 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk1P22518 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk1P22518 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk1P22518 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Clk1P22518 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk1P22518 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Clk1P22518 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clk1P22518 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk1P22518 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Clk1P22518 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk1P22518 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk1P22518 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.62■□□□□ 0.41
Clk1P22518 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk1P22518 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Clk1P22518 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk1P22518 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk1P22518 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk1P22518 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.61■□□□□ 0.41
Clk1P22518 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Clk1P22518 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Clk1P22518 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk1P22518 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk1P22518 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk1P22518 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk1P22518 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk1P22518 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk1P22518 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.6■□□□□ 0.41
Clk1P22518 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Clk1P22518 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clk1P22518 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clk1P22518 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clk1P22518 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clk1P22518 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clk1P22518 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.6■□□□□ 0.41
Clk1P22518 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms