Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.11■□□□□ 0.33
Cd48P18181 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd48P18181 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd48P18181 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cd48P18181 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Cd48P18181 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd48P18181 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cd48P18181 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Cd48P18181 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd48P18181 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd48P18181 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cd48P18181 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd48P18181 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd48P18181 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd48P18181 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd48P18181 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cd48P18181 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.1■□□□□ 0.33
Cd48P18181 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Cd48P18181 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd48P18181 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cd48P18181 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd48P18181 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd48P18181 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd48P18181 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd48P18181 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.09■□□□□ 0.33
Cd48P18181 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd48P18181 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd48P18181 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd48P18181 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd48P18181 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd48P18181 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd48P18181 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd48P18181 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd48P18181 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.08■□□□□ 0.32
Cd48P18181 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cd48P18181 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd48P18181 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd48P18181 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd48P18181 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cd48P18181 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd48P18181 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd48P18181 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cd48P18181 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd48P18181 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.07■□□□□ 0.32
Cd48P18181 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd48P18181 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd48P18181 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd48P18181 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.07■□□□□ 0.32
Cd48P18181 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cd48P18181 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd48P18181 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cd48P18181 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd48P18181 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd48P18181 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd48P18181 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd48P18181 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd48P18181 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd48P18181 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd48P18181 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cd48P18181 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cd48P18181 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd48P18181 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd48P18181 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd48P18181 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd48P18181 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd48P18181 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd48P18181 Gm9847-201ENSMUST00000052528 599 ntBASIC17.06■□□□□ 0.32
Cd48P18181 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd48P18181 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.06■□□□□ 0.32
Cd48P18181 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Cd48P18181 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd48P18181 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd48P18181 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Cd48P18181 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cd48P18181 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.05■□□□□ 0.32
Cd48P18181 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd48P18181 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd48P18181 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd48P18181 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd48P18181 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd48P18181 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cd48P18181 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd48P18181 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd48P18181 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cd48P18181 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd48P18181 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.04■□□□□ 0.32
Cd48P18181 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.04■□□□□ 0.32
Cd48P18181 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd48P18181 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd48P18181 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd48P18181 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd48P18181 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cd48P18181 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd48P18181 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd48P18181 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd48P18181 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd48P18181 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd48P18181 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cd48P18181 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd48P18181 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms