Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl1P10146 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ccl1P10146 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.85□□□□□ -0.03
Ccl1P10146 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.85□□□□□ -0.03
Ccl1P10146 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl1P10146 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.85□□□□□ -0.03
Ccl1P10146 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl1P10146 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl1P10146 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl1P10146 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.85□□□□□ -0.03
Ccl1P10146 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl1P10146 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl1P10146 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ccl1P10146 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl1P10146 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl1P10146 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl1P10146 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ccl1P10146 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl1P10146 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl1P10146 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl1P10146 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ccl1P10146 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl1P10146 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl1P10146 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl1P10146 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ccl1P10146 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ccl1P10146 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccl1P10146 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccl1P10146 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl1P10146 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl1P10146 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ccl1P10146 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl1P10146 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl1P10146 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ccl1P10146 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl1P10146 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccl1P10146 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.83□□□□□ -0.04
Ccl1P10146 Mir6236-201ENSMUST00000184437 123 ntBASIC14.83□□□□□ -0.04
Ccl1P10146 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl1P10146 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl1P10146 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl1P10146 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl1P10146 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl1P10146 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl1P10146 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccl1P10146 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl1P10146 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl1P10146 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl1P10146 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ccl1P10146 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl1P10146 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl1P10146 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl1P10146 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccl1P10146 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl1P10146 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl1P10146 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl1P10146 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl1P10146 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccl1P10146 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl1P10146 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccl1P10146 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.82□□□□□ -0.04
Ccl1P10146 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl1P10146 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl1P10146 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl1P10146 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl1P10146 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.81□□□□□ -0.04
Ccl1P10146 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ccl1P10146 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl1P10146 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.81□□□□□ -0.04
Ccl1P10146 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl1P10146 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl1P10146 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl1P10146 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ccl1P10146 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccl1P10146 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccl1P10146 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccl1P10146 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl1P10146 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Ccl1P10146 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccl1P10146 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl1P10146 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl1P10146 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Ccl1P10146 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.8□□□□□ -0.04
Ccl1P10146 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccl1P10146 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccl1P10146 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccl1P10146 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccl1P10146 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccl1P10146 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccl1P10146 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.8□□□□□ -0.04
Ccl1P10146 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccl1P10146 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms