Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a2P08122 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a2P08122 Gm22325-201ENSMUST00000158904 308 ntBASIC18.05■□□□□ 0.48
Col4a2P08122 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a2P08122 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a2P08122 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.05■□□□□ 0.48
Col4a2P08122 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a2P08122 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a2P08122 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a2P08122 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a2P08122 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a2P08122 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a2P08122 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a2P08122 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Col4a2P08122 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Col4a2P08122 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a2P08122 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a2P08122 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a2P08122 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col4a2P08122 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.03■□□□□ 0.48
Col4a2P08122 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.03■□□□□ 0.48
Col4a2P08122 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a2P08122 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a2P08122 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a2P08122 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.03■□□□□ 0.48
Col4a2P08122 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a2P08122 Gm7860-201ENSMUST00000121190 879 ntBASIC18.03■□□□□ 0.48
Col4a2P08122 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.03■□□□□ 0.48
Col4a2P08122 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Col4a2P08122 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a2P08122 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col4a2P08122 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.02■□□□□ 0.48
Col4a2P08122 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col4a2P08122 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col4a2P08122 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.02■□□□□ 0.48
Col4a2P08122 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col4a2P08122 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col4a2P08122 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.02■□□□□ 0.48
Col4a2P08122 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.02■□□□□ 0.48
Col4a2P08122 Gm27275-201ENSMUST00000184318 272 ntBASIC18.02■□□□□ 0.48
Col4a2P08122 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col4a2P08122 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Col4a2P08122 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Col4a2P08122 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.02■□□□□ 0.48
Col4a2P08122 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col4a2P08122 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.02■□□□□ 0.47
Col4a2P08122 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col4a2P08122 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Col4a2P08122 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col4a2P08122 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Col4a2P08122 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col4a2P08122 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a2P08122 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a2P08122 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a2P08122 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.01■□□□□ 0.47
Col4a2P08122 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a2P08122 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Col4a2P08122 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a2P08122 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18■□□□□ 0.47
Col4a2P08122 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a2P08122 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a2P08122 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a2P08122 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a2P08122 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a2P08122 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a2P08122 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a2P08122 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a2P08122 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a2P08122 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a2P08122 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.99■□□□□ 0.47
Col4a2P08122 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.99■□□□□ 0.47
Col4a2P08122 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.99■□□□□ 0.47
Col4a2P08122 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a2P08122 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a2P08122 AA386476-201ENSMUST00000098781 1665 ntBASIC17.98■□□□□ 0.47
Col4a2P08122 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a2P08122 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a2P08122 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a2P08122 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a2P08122 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a2P08122 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.98■□□□□ 0.47
Col4a2P08122 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Col4a2P08122 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.98■□□□□ 0.47
Col4a2P08122 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.98■□□□□ 0.47
Col4a2P08122 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a2P08122 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a2P08122 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a2P08122 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.97■□□□□ 0.47
Col4a2P08122 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a2P08122 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a2P08122 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a2P08122 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a2P08122 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a2P08122 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Col4a2P08122 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Col4a2P08122 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a2P08122 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a2P08122 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a2P08122 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.96■□□□□ 0.47
Col4a2P08122 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms