Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Limk2O54785 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limk2O54785 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limk2O54785 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.43■□□□□ 0.7
Limk2O54785 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.43■□□□□ 0.7
Limk2O54785 Gm27011-201ENSMUST00000182352 972 ntBASIC19.43■□□□□ 0.7
Limk2O54785 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limk2O54785 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Limk2O54785 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Limk2O54785 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limk2O54785 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Limk2O54785 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.42■□□□□ 0.7
Limk2O54785 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.42■□□□□ 0.7
Limk2O54785 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Limk2O54785 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.42■□□□□ 0.7
Limk2O54785 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.42■□□□□ 0.7
Limk2O54785 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.42■□□□□ 0.7
Limk2O54785 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.42■□□□□ 0.7
Limk2O54785 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Limk2O54785 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Limk2O54785 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Limk2O54785 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk2O54785 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk2O54785 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Limk2O54785 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk2O54785 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Limk2O54785 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.41■□□□□ 0.7
Limk2O54785 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk2O54785 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk2O54785 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk2O54785 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk2O54785 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Limk2O54785 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Limk2O54785 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Limk2O54785 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Limk2O54785 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Limk2O54785 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limk2O54785 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limk2O54785 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limk2O54785 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.4■□□□□ 0.7
Limk2O54785 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Limk2O54785 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Limk2O54785 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.4■□□□□ 0.7
Limk2O54785 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Limk2O54785 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Limk2O54785 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Limk2O54785 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Limk2O54785 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.4■□□□□ 0.7
Limk2O54785 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Limk2O54785 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Limk2O54785 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Limk2O54785 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Limk2O54785 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
Limk2O54785 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Limk2O54785 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Limk2O54785 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Limk2O54785 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Limk2O54785 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.39■□□□□ 0.69
Limk2O54785 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.39■□□□□ 0.69
Limk2O54785 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.39■□□□□ 0.69
Limk2O54785 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Limk2O54785 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Limk2O54785 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Limk2O54785 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Limk2O54785 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Limk2O54785 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Limk2O54785 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Limk2O54785 Gm10602-201ENSMUST00000098239 609 ntBASIC19.38■□□□□ 0.69
Limk2O54785 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Limk2O54785 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Limk2O54785 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Limk2O54785 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Limk2O54785 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Limk2O54785 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Limk2O54785 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Limk2O54785 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Limk2O54785 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Limk2O54785 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Limk2O54785 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Limk2O54785 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Limk2O54785 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Limk2O54785 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Limk2O54785 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.36■□□□□ 0.69
Limk2O54785 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Limk2O54785 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Limk2O54785 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Limk2O54785 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Limk2O54785 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Limk2O54785 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Limk2O54785 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Limk2O54785 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Limk2O54785 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Limk2O54785 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk2O54785 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk2O54785 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Limk2O54785 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.35■□□□□ 0.69
Limk2O54785 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Limk2O54785 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk2O54785 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk2O54785 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms