Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.87■□□□□ 0.93
Per1O35973 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.87■□□□□ 0.93
Per1O35973 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.87■□□□□ 0.93
Per1O35973 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Per1O35973 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Per1O35973 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Per1O35973 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Per1O35973 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Per1O35973 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Per1O35973 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Per1O35973 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Per1O35973 Gm12933-201ENSMUST00000120203 872 ntBASIC20.86■□□□□ 0.93
Per1O35973 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Per1O35973 Gm6420-201ENSMUST00000193885 723 ntBASIC20.86■□□□□ 0.93
Per1O35973 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Per1O35973 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Per1O35973 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Per1O35973 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Per1O35973 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Per1O35973 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Per1O35973 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Per1O35973 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Per1O35973 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Per1O35973 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Per1O35973 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Per1O35973 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Per1O35973 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Per1O35973 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Per1O35973 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Per1O35973 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Per1O35973 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Per1O35973 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Per1O35973 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Per1O35973 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Per1O35973 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Per1O35973 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Per1O35973 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Per1O35973 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.84■□□□□ 0.93
Per1O35973 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Per1O35973 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Per1O35973 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Per1O35973 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Per1O35973 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Per1O35973 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Per1O35973 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Per1O35973 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Per1O35973 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Per1O35973 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.83■□□□□ 0.93
Per1O35973 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.83■□□□□ 0.93
Per1O35973 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Per1O35973 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Per1O35973 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Per1O35973 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Per1O35973 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Per1O35973 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Per1O35973 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Per1O35973 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Per1O35973 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Per1O35973 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Per1O35973 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Per1O35973 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.82■□□□□ 0.92
Per1O35973 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.82■□□□□ 0.92
Per1O35973 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Per1O35973 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.82■□□□□ 0.92
Per1O35973 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Per1O35973 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Per1O35973 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Per1O35973 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Per1O35973 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Per1O35973 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Per1O35973 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Per1O35973 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.81■□□□□ 0.92
Per1O35973 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Per1O35973 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Per1O35973 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Per1O35973 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.81■□□□□ 0.92
Per1O35973 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Per1O35973 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Per1O35973 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Per1O35973 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Per1O35973 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Per1O35973 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Per1O35973 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Per1O35973 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.8■□□□□ 0.92
Per1O35973 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.8■□□□□ 0.92
Per1O35973 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Per1O35973 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Per1O35973 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Per1O35973 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.8■□□□□ 0.92
Per1O35973 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Per1O35973 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.8■□□□□ 0.92
Per1O35973 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Per1O35973 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Per1O35973 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.8■□□□□ 0.92
Per1O35973 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Per1O35973 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Per1O35973 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Per1O35973 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.79■□□□□ 0.92
Per1O35973 Nespas-201ENSMUST00000143738 1083 ntBASIC20.79■□□□□ 0.92
Per1O35973 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms