Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Nr1i3O35627 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nr1i3O35627 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1i3O35627 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1i3O35627 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1i3O35627 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.58■□□□□ 0.89
Nr1i3O35627 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1i3O35627 Gm13241-201ENSMUST00000094493 780 ntBASIC20.58■□□□□ 0.89
Nr1i3O35627 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1i3O35627 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nr1i3O35627 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Nr1i3O35627 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nr1i3O35627 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.58■□□□□ 0.88
Nr1i3O35627 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.58■□□□□ 0.88
Nr1i3O35627 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nr1i3O35627 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nr1i3O35627 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr1i3O35627 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.57■□□□□ 0.88
Nr1i3O35627 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.57■□□□□ 0.88
Nr1i3O35627 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.57■□□□□ 0.88
Nr1i3O35627 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr1i3O35627 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nr1i3O35627 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nr1i3O35627 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.57■□□□□ 0.88
Nr1i3O35627 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.57■□□□□ 0.88
Nr1i3O35627 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nr1i3O35627 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.56■□□□□ 0.88
Nr1i3O35627 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1i3O35627 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1i3O35627 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1i3O35627 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1i3O35627 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.56■□□□□ 0.88
Nr1i3O35627 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Nr1i3O35627 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1i3O35627 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1i3O35627 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1i3O35627 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1i3O35627 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.56■□□□□ 0.88
Nr1i3O35627 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nr1i3O35627 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1i3O35627 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1i3O35627 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Nr1i3O35627 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1i3O35627 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1i3O35627 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nr1i3O35627 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Nr1i3O35627 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1i3O35627 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.54■□□□□ 0.88
Nr1i3O35627 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1i3O35627 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1i3O35627 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1i3O35627 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1i3O35627 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Nr1i3O35627 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1i3O35627 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1i3O35627 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1i3O35627 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1i3O35627 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.54■□□□□ 0.88
Nr1i3O35627 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1i3O35627 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1i3O35627 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Nr1i3O35627 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.54■□□□□ 0.88
Nr1i3O35627 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1i3O35627 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nr1i3O35627 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nr1i3O35627 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1i3O35627 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1i3O35627 Gm21956-201ENSMUST00000179946 522 ntBASIC20.53■□□□□ 0.88
Nr1i3O35627 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1i3O35627 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.53■□□□□ 0.88
Nr1i3O35627 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1i3O35627 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Nr1i3O35627 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Nr1i3O35627 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1i3O35627 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1i3O35627 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nr1i3O35627 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1i3O35627 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1i3O35627 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1i3O35627 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1i3O35627 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1i3O35627 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1i3O35627 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Nr1i3O35627 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1i3O35627 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nr1i3O35627 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nr1i3O35627 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Nr1i3O35627 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr1i3O35627 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr1i3O35627 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nr1i3O35627 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Nr1i3O35627 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
Nr1i3O35627 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nr1i3O35627 Smad6-203ENSMUST00000179458 273 ntBASIC20.51■□□□□ 0.87
Nr1i3O35627 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nr1i3O35627 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr1i3O35627 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr1i3O35627 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr1i3O35627 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nr1i3O35627 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms