Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clk2O35491 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clk2O35491 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clk2O35491 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clk2O35491 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.88■□□□□ 0.93
Clk2O35491 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Clk2O35491 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clk2O35491 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clk2O35491 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Clk2O35491 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Clk2O35491 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clk2O35491 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clk2O35491 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clk2O35491 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clk2O35491 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clk2O35491 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clk2O35491 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clk2O35491 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Clk2O35491 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clk2O35491 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clk2O35491 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clk2O35491 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.87■□□□□ 0.93
Clk2O35491 Mir5133-201ENSMUST00000174955 77 ntBASIC20.87■□□□□ 0.93
Clk2O35491 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clk2O35491 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Clk2O35491 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clk2O35491 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Clk2O35491 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clk2O35491 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Clk2O35491 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clk2O35491 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clk2O35491 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.86■□□□□ 0.93
Clk2O35491 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.86■□□□□ 0.93
Clk2O35491 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clk2O35491 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clk2O35491 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clk2O35491 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clk2O35491 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clk2O35491 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clk2O35491 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Clk2O35491 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clk2O35491 Gm7290-201ENSMUST00000104990 617 ntBASIC20.85■□□□□ 0.93
Clk2O35491 Gm12918-201ENSMUST00000120234 636 ntBASIC20.85■□□□□ 0.93
Clk2O35491 Gm15710-201ENSMUST00000121821 636 ntBASIC20.85■□□□□ 0.93
Clk2O35491 Gm5075-201ENSMUST00000196916 622 ntBASIC20.85■□□□□ 0.93
Clk2O35491 Gm6365-201ENSMUST00000054711 744 ntBASIC20.85■□□□□ 0.93
Clk2O35491 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.85■□□□□ 0.93
Clk2O35491 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.85■□□□□ 0.93
Clk2O35491 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clk2O35491 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clk2O35491 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clk2O35491 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clk2O35491 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clk2O35491 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clk2O35491 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clk2O35491 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clk2O35491 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clk2O35491 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Clk2O35491 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Clk2O35491 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Clk2O35491 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.84■□□□□ 0.93
Clk2O35491 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.84■□□□□ 0.93
Clk2O35491 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clk2O35491 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clk2O35491 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Clk2O35491 Gm13148-201ENSMUST00000118892 745 ntBASIC20.83■□□□□ 0.93
Clk2O35491 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clk2O35491 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.83■□□□□ 0.93
Clk2O35491 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clk2O35491 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clk2O35491 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Clk2O35491 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clk2O35491 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clk2O35491 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Clk2O35491 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.83■□□□□ 0.92
Clk2O35491 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clk2O35491 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clk2O35491 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clk2O35491 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clk2O35491 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.82■□□□□ 0.92
Clk2O35491 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.82■□□□□ 0.92
Clk2O35491 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clk2O35491 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clk2O35491 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clk2O35491 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clk2O35491 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clk2O35491 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Clk2O35491 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clk2O35491 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clk2O35491 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clk2O35491 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
Clk2O35491 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clk2O35491 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clk2O35491 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.81■□□□□ 0.92
Clk2O35491 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Clk2O35491 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Clk2O35491 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clk2O35491 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Clk2O35491 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clk2O35491 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms