Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ebf3O08791 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ebf3O08791 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf3O08791 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Ebf3O08791 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf3O08791 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf3O08791 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf3O08791 Gm12441-201ENSMUST00000121806 588 ntBASIC19.81■□□□□ 0.76
Ebf3O08791 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf3O08791 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.81■□□□□ 0.76
Ebf3O08791 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf3O08791 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf3O08791 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf3O08791 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ebf3O08791 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ebf3O08791 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ebf3O08791 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ebf3O08791 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ebf3O08791 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ebf3O08791 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ebf3O08791 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ebf3O08791 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ebf3O08791 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ebf3O08791 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ebf3O08791 Gm38205-201ENSMUST00000192243 258 ntBASIC19.8■□□□□ 0.76
Ebf3O08791 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
Ebf3O08791 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ebf3O08791 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ebf3O08791 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ebf3O08791 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ebf3O08791 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.79■□□□□ 0.76
Ebf3O08791 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ebf3O08791 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ebf3O08791 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ebf3O08791 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.79■□□□□ 0.76
Ebf3O08791 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ebf3O08791 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ebf3O08791 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ebf3O08791 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ebf3O08791 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ebf3O08791 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf3O08791 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf3O08791 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf3O08791 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf3O08791 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf3O08791 Gm13146-201ENSMUST00000118508 780 ntBASIC19.78■□□□□ 0.76
Ebf3O08791 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf3O08791 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf3O08791 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf3O08791 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf3O08791 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf3O08791 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ebf3O08791 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf3O08791 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf3O08791 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf3O08791 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Ebf3O08791 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Ebf3O08791 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ebf3O08791 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Ebf3O08791 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ebf3O08791 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ebf3O08791 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ebf3O08791 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ebf3O08791 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.76■□□□□ 0.75
Ebf3O08791 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.76■□□□□ 0.75
Ebf3O08791 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf3O08791 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf3O08791 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf3O08791 Gm10653-202ENSMUST00000139570 835 ntBASIC19.76■□□□□ 0.75
Ebf3O08791 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ebf3O08791 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.76■□□□□ 0.75
Ebf3O08791 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf3O08791 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf3O08791 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf3O08791 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf3O08791 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ebf3O08791 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf3O08791 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf3O08791 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ebf3O08791 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.75■□□□□ 0.75
Ebf3O08791 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf3O08791 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf3O08791 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf3O08791 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf3O08791 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf3O08791 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.75■□□□□ 0.75
Ebf3O08791 Nespas-201ENSMUST00000143738 1083 ntBASIC19.75■□□□□ 0.75
Ebf3O08791 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.75■□□□□ 0.75
Ebf3O08791 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.75■□□□□ 0.75
Ebf3O08791 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.75■□□□□ 0.75
Ebf3O08791 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ebf3O08791 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf3O08791 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.74■□□□□ 0.75
Ebf3O08791 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Ebf3O08791 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf3O08791 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ebf3O08791 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.74■□□□□ 0.75
Ebf3O08791 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf3O08791 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.74■□□□□ 0.75
Ebf3O08791 Gm4968-201ENSMUST00000071458 858 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms